Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca09g01671 ATGAGGGTATGGGAGAAGGCCAGTGGAGCCATCAAGGACAGGAACAGCATATGGGTTGCAAAATTCTCGCGAAAAGGTCCATTCCATAACCCTGATTTGGAAACGGTGATAATCAAGGCCACGAGCCATGACAATCACCACATAGACATGAAGAACATGCAGAGAGTGTTCCAATGGCTAAGAACCTCACCCTTGTACCTGAAACCTCTCATATGGGCTCTCTCCATGCGCATGCAAAAGACTCGAAGCTGGGTTGTGGCGCTTAAAGGCTTGATGCTCATTCATGGCGTTTTCTGCTGTGACATCCCTGCGGTGCAACGCATGGGGAGGTTACCCTTTGACCTATCAAACTTCTCCGATGGCCATTTGAGCCCCGCAAAGGCTTGGAGCTTCAACACATTCGTTCGTGGCTATTTTGCGTATTTGGATCAAAGGTCAGCGTTTGTGTCCTCCGAGTTTAAGTCCAAACAGAAGAAGAATGACAAGGAGGTGGAGGTGGTGGAGACGTTGATGGAAGAGCTTGAGAAATTGCAAAAGCTGCAAGGGTTGATTGACATGCTTCTTCAGATCAGGCCCCGGAATGAGAACCTGAATATTGGTCTTATTCTTGAAGCTATGGATTGTGTTATAGTTGAGGTTTTTGGTGTGTATAGTAAGTTTTGCAACAGGATAGCCAAGGTTTTGATGAGGATATATGAAGTAGGTGGGAGGGTGGAAGCGAGCATTGGCCTCAAGATTCTGCAGAAAGCAGCCATTCAAGGGGAGGAGTTGTCTTTGTTCTTTGACTTTTGTAAGGATATTGGGGTCCTCAATGCCTCTCAGTGCCCTAAGGTTGAAAGAATTTCCATGGAGGATATTCAAGATCTTGAGAGGATAATCAGTGGTACCTCTACCAACAAGGGTAATGGTGTGGCCAATGATGAGGACAAGGCTATTGTATTGAGAGATTGTTCTTCTTCCCTTGCAAACTTTTCGCCCCAGAAGGAGTCAGAGAATGGTTTGATGACTGTGATCACTCACCAATGGGAGGTGTTTGATGATGATGTTATAATGGCCGGTGCTAAAGGAATGCATTGTGTCTCTAATGGTGCAAAGGCTACTGGCATCGCAACCAACCCTTTTGTGGAATCATATAGCATCGTGCCTTATATTCCTGCTCACACTCAACCTCTTCCTGATCTAATTAGTTTTTAG 1194 0.4573 MRVWEKASGAIKDRNSIWVAKFSRKGPFHNPDLETVIIKATSHDNHHIDMKNMQRVFQWLRTSPLYLKPLIWALSMRMQKTRSWVVALKGLMLIHGVFCCDIPAVQRMGRLPFDLSNFSDGHLSPAKAWSFNTFVRGYFAYLDQRSAFVSSEFKSKQKKNDKEVEVVETLMEELEKLQKLQGLIDMLLQIRPRNENLNIGLILEAMDCVIVEVFGVYSKFCNRIAKVLMRIYEVGGRVEASIGLKILQKAAIQGEELSLFFDFCKDIGVLNASQCPKVERISMEDIQDLERIISGTSTNKGNGVANDEDKAIVLRDCSSSLANFSPQKESENGLMTVITHQWEVFDDDVIMAGAKGMHCVSNGAKATGIATNPFVESYSIVPYIPAHTQPLPDLISF 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca09g01671 397 SUPERFAMILY GAT-like domain 172 294 - -
Cca09g01671 397 CDD ANTH_N_AP180_plant 33 148 - -
Cca09g01671 397 Coils Coil 160 180 - -
Cca09g01671 397 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 395 IPR045192 GO:0048268|GO:0072583
Cca09g01671 397 ProSiteProfiles ENTH domain profile. 25 156 IPR013809 -
Cca09g01671 397 Gene3D ANTH domain 154 310 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Cca09g01671 397 Pfam ANTH domain 32 293 IPR011417 GO:0005543
Cca09g01671 397 Gene3D - 4 153 IPR008942 -
Cca09g01671 397 PANTHER OS08G0467300 PROTEIN 1 395 - -
Cca09g01671 397 SUPERFAMILY ENTH/VHS domain 32 148 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca09g01671 Cca-Chr9 40731145 40733810 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca09g01671 09 40731145 40733810 Cca09g01671 09 40731145 40733810 ECH