Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00836 ATGGGATCACTCATGATCCTCCTCTCCTTGCAACCTCTCAGCCTCATCTTTCTCCTCATTATCTTCTACATAACACTCTTCCACCTCCGGCGACCCGACAAATTCTCCGGCGCCGGTCCGGCAACCTATCCCCTCCTAGGATGTCTCATATCCTTCTACAAGAACAAGCACCGTTTGCTAGATTGGTACACCGAGTTACTATCTCAGTCCACCACCAACACCATCGTGGTTCAAAGGCTAGGAGCACGCAGAACCATTATCACTGCAAACCCACAAAACGTTGAGTACATACTCAAGACCAACTTCAACAACTTCCCCAAAGGCAAGCCCTTCACTGAGATCCTCGGTGATTTCCTCGGCCAAGGCATTTTCAACGTGGACGGGGAGCTATGGCTCGCTCAGAGAAAATTGGCGAGCCATGAGTTCTCTACCAAGTCCTTGAGGGAGTTTTTCATGCACACGTTGGAGAGGGAAGTGTGTGAGAGGCTTTTGCCTGTGCTTGAAGCCTTGTCCAATGAGAAAAAGGTGGTTGACTTGCAAGAGCTTCTAGGGAGGTTCTCGTTCAACGTGATCTGCAAGTTCACATTAGGGACTAATAGGTGCTGTTTGGACCCTTCTGTTCCCACTTGTCCCCTTGCAAGGGCTTTTGATGTGGCTGCTGAAGTCTCTGCGAGACGTGGGGCAGCACCTTTGTTCATGATCTGGAGGGTGAAGAGATGGCTGTGTGCTGGATCTGAGAGATTGCTTAAGGATGCTGTTGGGGAGGTTAAGACTCATGTCATGAGAATGATTCATGagaggaagaggaagaggaagaggaagcaggaGGGGGAGGAACATGGTGTGGAAGATGAGGATCTCTTGTCAAGGCTTATATGTGCTGGTCATGAGGATGAGGTGATTAGAGACATGGTGATAAGTTTCATCATGGCAGGGAGGGACACTACTTCATCAGCCATGACATGGCTCTTTTGGATACTATCACATTATTCTCATTTGGAGAGGCAGATAGTGGAAGAGGCTAAAGGGGTGTTGGATTATGAGTCATTGAAGAGTTTGAGTTTCTTGAAGGCATGTTTGTGTGAGTCCATGAGGCTGTATCCACCAGTGGCGTGGGACTCTAAGCATGCTTGTGGTGATGATGTGTTGCCAGATGGCACTGAGGCTGGTCCAAGGGTGTGTCCAGGGAAGGAAATGGCCTTCATTCAGATGAAGTATGTGGTGGCTTCAGTTCTTTGCAGATTCACATTTAGAATTGTTAGTCCTCAGAGGCCTATATTCGTGCCACTGCTCACGGCACACATGGCCGGCGGCTTGAGAGTATTGGTTTGTAAAAGGGAAAAGGTATAA 1350 0.4748 MGSLMILLSLQPLSLIFLLIIFYITLFHLRRPDKFSGAGPATYPLLGCLISFYKNKHRLLDWYTELLSQSTTNTIVVQRLGARRTIITANPQNVEYILKTNFNNFPKGKPFTEILGDFLGQGIFNVDGELWLAQRKLASHEFSTKSLREFFMHTLEREVCERLLPVLEALSNEKKVVDLQELLGRFSFNVICKFTLGTNRCCLDPSVPTCPLARAFDVAAEVSARRGAAPLFMIWRVKRWLCAGSERLLKDAVGEVKTHVMRMIHERKRKRKRKQEGEEHGVEDEDLLSRLICAGHEDEVIRDMVISFIMAGRDTTSSAMTWLFWILSHYSHLERQIVEEAKGVLDYESLKSLSFLKACLCESMRLYPPVAWDSKHACGDDVLPDGTEAGPRVCPGKEMAFIQMKYVVASVLCRFTFRIVSPQRPIFVPLLTAHMAGGLRVLVCKREKV 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00836 449 Gene3D Cytochrome P450 389 448 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00836 449 Gene3D Cytochrome P450 38 388 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00836 449 SUPERFAMILY Cytochrome P450 38 446 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00836 449 PANTHER CYTOCHROME P450, FAMILY 94, SUBFAMILY B, POLYPEPTIDE 2 15 388 - -
Cca07g00836 449 PANTHER CYTOCHROME P450, FAMILY 94, SUBFAMILY B, POLYPEPTIDE 2 389 446 - -
Cca07g00836 449 PANTHER CYTOCHROME P450 389 446 - -
Cca07g00836 449 PANTHER CYTOCHROME P450 15 388 - -
Cca07g00836 449 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00836 449 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00836 449 PRINTS E-class P450 group I signature 394 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca07g00836 449 Pfam Cytochrome P450 39 382 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00836 Cca-Chr7 14123772 14125750 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00836 4 449 Cytochrome P450 AT3G48520 49.803 1.17e-156 451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00836 07 14123772 14125750 Cca07g00836 07 14123772 14125750 ECH
Cca09g02733 09 53035002 53036160 Cca07g00836 07 14123772 14125750 ECH