Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00182 ATGGCTCGTGGCTTCCAAGTTCAAGCAACTTCAATCACTATATTTGCCCATTTGTTGTTCATAGCAATAACAACCCTTGTGTTAGTTTGGCTCCTACACTTCCGTGAAGGTGTTGCCTTCAAATCTTCCAACCCAATCAAGATCTTCAACCTGCATCCACTTCTAATGGTAATTGGGTTTATTTTAGTTGGTGGAGAAGCTATCATGGCATACAAGTCTGTGCCAGGAAAAAGGAGGTCAGTGAAGGTGGTTCATCTTCTATTGCATTTCATAGCTCTAGTGGCTGGAATTTTAGGGATTGTTGCAGTTTTCATATCTAAGAATAAAGCAGGTCTTCCTGATATGTATACATTACACTCTTGGCTAGGCATGTCAGCAATCTGCCTATTTGGTTTACAGTATATCTTGGGGTTCTTCGCATTTTTCTTCCCAGGTGCAGAAAAGTCTACTAGAACTAGCCTTTTGCCATGGCACAAATTTATGGGCATGGTGATCTTTCTCCTTGCAGTTTCCACTGCTGAGATGGGTTTGGTTCAATATTTTCAAGATTTTGGCCTTTTCCGAAGCCAAGAGGCACTAATACTCAACTCCACTGGCctcttgctctttctctttgctgtttttgtttccctctctGTCATTCTCCCAAGAAATTTCTGA 660 0.3909 MARGFQVQATSITIFAHLLFIAITTLVLVWLLHFREGVAFKSSNPIKIFNLHPLLMVIGFILVGGEAIMAYKSVPGKRRSVKVVHLLLHFIALVAGILGIVAVFISKNKAGLPDMYTLHSWLGMSAICLFGLQYILGFFAFFFPGAEKSTRTSLLPWHKFMGMVIFLLAVSTAEMGLVQYFQDFGLFRSQEALILNSTGLLLFLFAVFVSLSVILPRNF 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00182 219 Gene3D - 5 219 - -
Cca06g00182 219 ProSiteProfiles Cytochrome b561 domain profile. 15 214 IPR006593 -
Cca06g00182 219 Pfam Eukaryotic cytochrome b561 51 178 IPR006593 -
Cca06g00182 219 PANTHER CYTOCHROME B561-RELATED 6 216 IPR043205 GO:0016491
Cca06g00182 219 PANTHER CYTOCHROME B561 FAMILY PROTEIN, EXPRESSED 6 216 - -
Cca06g00182 219 SMART 561_7 51 177 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00182 Cca-Chr6 4297020 4299493 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00182 6 212 Chloroplast and Mitochondria Gene Families AT4G25570 41.706 3.61e-59 186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00182 06 4297020 4299493 Cca06g00182 06 4297020 4299493 ECH