Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00181 ATGGGTTCATTAGGTATCTCAGGTTTGGCACACTTGTTTGGTGTCTTAGCCTTCATCCTCTTGCTTGTTTGGTTGTTGCATTACCGCGAAGGAATTGAATATGATTCAGACAACGGATTTCGTGTCTTCAATGTTCATCCATTATTAATGTACTCGGGGTTCATTTTCCTTGCTGGTGAAGGTATGATGGCATTCCAAACGATACCAAGCGAAAGGAGAGTGAGGAAGTTTGTTCACATGGCATTGCATTTGATTGCTATAATTCTTGGTGTTGTTGGTTTGTGTGCCGTTTTCAAGTTCCATGATATGTCTCACATTCCCCACCTTTACACCCTCCATTCATGGATTGGCATTGCCACCTTCTGCTTCTTTGGATTGCAGTGGCTCTTTGGTTTTGGTGTGTTCATGCTTCAAGGAGCTTCACCTGCTACAAGGGCAAAAGTGCTACCATGGCACAAAGTTTTTGGAAGAGCACTGTTGTTCTTGGCAGTATGTGCTGCAGAAACAGGACTTATGGAGAAGCACAGTTTCTTACAACTGAAGCCATATCAGAGAGAGTCTTATTTGGTCAACTTCACGGGCCTTGCCATTCTCTTGTTTGGAGCTTTTGTAAACTTTTCTATTGTCATATCTTAG 636 0.4261 MGSLGISGLAHLFGVLAFILLLVWLLHYREGIEYDSDNGFRVFNVHPLLMYSGFIFLAGEGMMAFQTIPSERRVRKFVHMALHLIAIILGVVGLCAVFKFHDMSHIPHLYTLHSWIGIATFCFFGLQWLFGFGVFMLQGASPATRAKVLPWHKVFGRALLFLAVCAAETGLMEKHSFLQLKPYQRESYLVNFTGLAILLFGAFVNFSIVIS 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00181 211 CDD Cyt_b561_ACYB-1_like 36 179 - -
Cca06g00181 211 Gene3D - 2 211 - -
Cca06g00181 211 PANTHER TRANSMEMBRANE ASCORBATE FERRIREDUCTASE 3-RELATED 5 210 - -
Cca06g00181 211 PANTHER CYTOCHROME B561-RELATED 5 210 IPR043205 GO:0016491
Cca06g00181 211 SMART 561_7 45 171 IPR006593 -
Cca06g00181 211 Pfam Eukaryotic cytochrome b561 45 177 IPR006593 -
Cca06g00181 211 ProSiteProfiles Cytochrome b561 domain profile. 9 209 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00181 Cca-Chr6 4271702 4274408 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g00181 9 210 Chloroplast and Mitochondria Gene Families AT1G14730 51.980 5.26e-76 226
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00181 06 4271702 4274408 Cca06g00181 06 4271702 4274408 ECH