Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g00157 ATGAGGCTATGGAAAAAGGCCGCGGGAGCATTGAAGGATAGGTACAGCATTTTGATCGCAAAGCTCTCACCGAGTGGCCCGTGTAAGAACCCTGGTCTTGAAACAGTGATCATCAAGGCCACTAGCCACGATGAACAATGCATGGATTACAAGAGCGTTCAAAGGGTTTTCAAATGGCTACGCACCTCACCCTTGTACCTTAAACCGCTTCTCTGCATTCTCTCCACAAGAATGGAAAAGACTCGTTCATGGGTCGTGGCACTCAAGGGGTTAATGCTCATTCATGGGGTGTTTTGTTTTGACCTACCCGCGGTGCAAAAAATGGGAAGGTTGCCATTTGATTTGACACACTTCAGTGATGGACACATAAACCCTCACAAGGCATGGGTTTTCAATGCCTTTGTTCGTTCCTACTTTGCATACTTGGACCATAAGTCATCGTTTGTGAGATTCGAGGCAACGAAAGAGGACAAGAGTGTGATGGAGGAGTTGCAAAGCTTGGAGACGATGCTTGGTTTGATTGATTTGCTTCTAGAAATCAAGCCTAGGATCCCCCACATGAACATCGTGCTTATTCTTGAGGCCATGGATTGTGTTATGGACGAGGTTTTGGAATTGTATAGTAAATTTTCCAAGAGGGTTCATCTAGTGTTGTGGAGAATAATTGACACGGGTGGAAAAGAGGAAGCATCGATTGGTCTTGAAGTTGTGAAAAAGGTTCAAATGCAAGGTGGTAAGATGACTATGTACTTTGATTTTTGTAGAGACATTGGGGTCCTTAACATTTCCGATTGCCCCGAAATTTTGAGGATCGATGAGAAAGACATTCATGAACTACAAACAATAAGGGATGGTGGTGTCTCCGAGAGGAAAAACTTGGAGGGTAATAATGGTGATGATAATGGGGTTGCGACATATGAGAATAACAACGCCATTGTGGTGAGAGATCGTGGTGCCACTGCCACCATTTCGGAGCAGAAGCAATCAAATTTGAGGACTGTGATCACTGACCAATGGGAGGTATTTGATGATGATTTAATTGTTGATGTAACGGATAGTCCCTCCAATGGGACAAGTGTGCCTATCATCACAACCAATAACCCTTTTGTGGATTCTTTGAGCATCGTACCTCATATTCCCATTTGCAgtgaaaactatcatttgtga 1167 0.4327 MRLWKKAAGALKDRYSILIAKLSPSGPCKNPGLETVIIKATSHDEQCMDYKSVQRVFKWLRTSPLYLKPLLCILSTRMEKTRSWVVALKGLMLIHGVFCFDLPAVQKMGRLPFDLTHFSDGHINPHKAWVFNAFVRSYFAYLDHKSSFVRFEATKEDKSVMEELQSLETMLGLIDLLLEIKPRIPHMNIVLILEAMDCVMDEVLELYSKFSKRVHLVLWRIIDTGGKEEASIGLEVVKKVQMQGGKMTMYFDFCRDIGVLNISDCPEILRIDEKDIHELQTIRDGGVSERKNLEGNNGDDNGVATYENNNAIVVRDRGATATISEQKQSNLRTVITDQWEVFDDDLIVDVTDSPSNGTSVPIITTNNPFVDSLSIVPHIPICSENYHL 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g00157 388 CDD ANTH_N_AP180_plant 33 148 - -
Cca06g00157 388 Pfam ANTH domain 33 280 IPR011417 GO:0005543
Cca06g00157 388 ProSiteProfiles ENTH domain profile. 25 156 IPR013809 -
Cca06g00157 388 PANTHER OS08G0467300 PROTEIN 1 353 - -
Cca06g00157 388 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 353 IPR045192 GO:0048268|GO:0072583
Cca06g00157 388 Gene3D ANTH domain 154 296 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Cca06g00157 388 Gene3D - 4 153 IPR008942 -
Cca06g00157 388 SUPERFAMILY ENTH/VHS domain 33 151 IPR008942 -
Cca06g00157 388 SUPERFAMILY GAT-like domain 157 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g00157 Cca-Chr6 3614820 3617251 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g00157 06 3614820 3617251 Cca06g00157 06 3614820 3617251 ECH