Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01493 ATGGTTTTGGCAACGTTTATCTCAATCTCACTCCTATTAGCACTAGCCTCTAAAATTTTTCTACATTGGCTCAAGGGAAGGCCTCTTTCTTCTCACAAGAACATGGGCCTTCCTCCGGGCCCACCAAGGTGGCCCATTGTTGGCAACCTCCTCCAATTAGGGCAACTTCCACATAGAGACTTGGCATCTCTATGTGACAAATATGGACCCTTGGTTTATCTAAAATTGGGCAACATCGATGCCATCACAACCAATGATCCTAATATTATACGTGAAATTCTTGTTTGCCAAGATGATGTTTTTGCCTCTCGCCCTCACACTCTTGCTGCGGTTCATTTAGCATATGGGTGTGGTGATGTAGCATTGGCCCCACTAGGGCCCCATTGGAAACGCATGAGAAGAATCTGCATGGAGCATTTGTTAACAACAAAGAGGCTTGAGTCCTTCTCAAGACACCGTCTAGAGGAAGCCCAACACCTTGTGAGGGATGTTTGGGCCCGGGCCCAAGATGAAAAGCCCATTAACTTGAGGGAGGTTTTGGGGGCTTTTTCAATGAACAATGTCACTAGAATGTTGTTGGGGAAACAATATTTTGGGTCTGAATCTTCAGGCCCACAAGAGGCTATGGAGTTCATGCACATAACCCATGAGTTGTTTTGGCTTTTGGGTGTGATATATTTGGGTGATTACTTGCCAATTTGGAGGTGGGTGGATCCTTATGGGTGTGAAAAGAAAATGAGGGAGGTGGAGAAAAGAGTGGATGATTTTCATTCCAAGATTATTGAAGAACATAGAAAGGCTAGGAAAGACAAGAAGAAGGGGAATAGAGAGGAGGGTGATGGAGACATGGATTTTGTGGATGTTTTACTATCTTTGCCAGGTGAAGATGGAAAAGAGCACATGGATGAGATAGAAATCAAAGCCTTGATTCAGGACATGATAGCTGCTGCAACAGACACTTCAGCAGTTACAAACGAATGGGCCATGGCAGAGGTAATCAAACACCCCCATGTCCTCCAAAAGGTCCAACAAGAACTCGACACAATCGTGGGCCCAAAACGAATGGTCTCAGAATCGGACTTGCCCCACCTTAACTACCTGCGCTGCGTCGTACGCGAAACCTTCCGCATGCACCCCGCGGGTCCCTTCCTCATTCCGCACGAGTCCCTTCGCGCCACCACCATCAACGGCTACCACATCCCCGCCAAGACACGTGTCTTCATCAACACGCATGGGCTGGGCCGCAACACCAGGGTCTGGGACAGCGTGGCCCAGTTCAGGCCCGAGAGGCACTGGCCCAATAACGGGGCCCGAGTTGAGATCAGTCATGGGCTGGACTTCAAGATTTTGCCCTTTAGTGCGGGGAAAAGGAAATGTCCAGGTGCACCTCTTGGGGTGAATTTGGTTTTGATGGCTTTGGCTAGGCTTTTTCATTGCTTTGATTGGGCCCCACCCAAGGGGATGGATCCTCAAGATGTTGATACTAGAGAGGTTTATGGGATGACCATGCCTAAGGCTCAGCCATTGATTGCTATTGCTAGACCTAGGTTGGCAAGGCATTTGTATCAATGA 1572 0.4822 MVLATFISISLLLALASKIFLHWLKGRPLSSHKNMGLPPGPPRWPIVGNLLQLGQLPHRDLASLCDKYGPLVYLKLGNIDAITTNDPNIIREILVCQDDVFASRPHTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFSRHRLEEAQHLVRDVWARAQDEKPINLREVLGAFSMNNVTRMLLGKQYFGSESSGPQEAMEFMHITHELFWLLGVIYLGDYLPIWRWVDPYGCEKKMREVEKRVDDFHSKIIEEHRKARKDKKKGNREEGDGDMDFVDVLLSLPGEDGKEHMDEIEIKALIQDMIAAATDTSAVTNEWAMAEVIKHPHVLQKVQQELDTIVGPKRMVSESDLPHLNYLRCVVRETFRMHPAGPFLIPHESLRATTINGYHIPAKTRVFINTHGLGRNTRVWDSVAQFRPERHWPNNGARVEISHGLDFKILPFSAGKRKCPGAPLGVNLVLMALARLFHCFDWAPPKGMDPQDVDTREVYGMTMPKAQPLIAIARPRLARHLYQ 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01493 523 Pfam Cytochrome P450 38 505 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01493 523 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01493 523 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01493 523 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01493 523 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01493 523 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01493 523 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01493 523 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01493 523 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01493 523 Gene3D Cytochrome P450 26 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01493 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Cca04g01493 523 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01493 523 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01493 523 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca04g01493 523 PANTHER CYTOCHROME P450 703A2-RELATED 30 523 - -
Cca04g01493 523 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 30 523 - -
Cca04g01493 523 SUPERFAMILY Cytochrome P450 38 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01493 Cca-Chr4 20973409 20975303 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01493 1 522 EF-hand Containing Proteins AT1G01280 75.191 0.0 788