Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01488 ATGGATTTGAATTTTCAAAATATAAACTGGGTGGGGAATATTTATCAGAAGTTTGAAGCAGTGTGCCAGGAGGTGGATGATATTGTAAGCCAGGATGCAGTTAAATATCTTGAGAATCATGTCCAGAATGTTGGAGACAATGTTAAAAAGTTCTATTCTGGAGTTGTAAATGATCTACTTCCTTTTCCTACCTTGGCCGGTTCAAAATATGAATCTCATTCAGTAGATTTGACAAATAACACTGGCTTTTCAGCTCCTGGTCATAAAGATAATAATAATAAAAGGGACGAGGAAAATCCCATCAATAATTTTATTAAGCCGTTACAGAATTCTAATGCAATTGATATTAATAATAATCAGCAAGCTGGTGTTCCTATCAAGCAAAACCTTGTAAATGAAGTTAGTGTTGAAACTTGCTATGATTCCCCGGAGGTGGGAGACTCTTATATAACTCAAGAAGAGGTTGGTGATGATTCAAGTGAAACTTCTGGGGCTGATAAGAAAGAAAACTTGCATACAAGCATTGAAGAGGTTGCTGTTGAGCCTGTGCCTAAACACATGGACTTGATATCTGTTAGAGAGAAAGGATCTCTTGAATTCCCTATACATAGTGAATCTAATTCTGATTCTTTGGACAGTGGATGTGAAGTTTTGATCAGAACAAAGGATAACGTAGATGTGAATGCAGGACAAAATTCATGTTTGATTGTTGAGGAAATTTCTATGAATTCATCCACCTCCCAATTGTCAAGTTCCCAGTCTCTTGATGAGGAAGAATCTATTAAAGTCTCCTTGTTCAGTGAATCGTCCGATGTTGTTTACGAGGCTACACATTGTATATTGGATGAAGTTTCACCTAATGATTCTGTTTCATGTGAGAGTCCTGTCACAAAGACAGAACCTTTATGCTTCAAAAGTACCTTAGCTTCTGACAGTCTATATTCAAAACCACTACGAAGCTACTCCTTTGAAATTGAATGTTGCCAAAACAATTCAGATAAATCACTGGCCAGTTCTATTGAATCCATTTTGGAAGACATTCAGTTGAATGATGATCCGAAGCTTGAGGAAAGCTGTGATCTGAAGCTTGAGGAAAGCTGTGATCTGAAGCTTGAGCAAAGCTGTGTATTTGTGGATGATAGTGAACTCTATGCAGTCTCCTCTAGAGCCCAAAAGCTTAGATCATACAAGAAAAGAATCAAGGATGCATTTGCTTCAAAGAAGAGGTTAGCAAAGGAGTATGAACAGCTAGCGATATGGTATGGAGACACTGATATTGAACCCAGTCAAGGTTCTTCACAAATTTTATTGCCTTTTGGCTCCAGAAAGTATATGGACTCAAAGAATTTGCAAGTGCAGCAAGCTTCTGAAACTGAGTGGGAGCTGCTGTAA 1392 0.3786 MDLNFQNINWVGNIYQKFEAVCQEVDDIVSQDAVKYLENHVQNVGDNVKKFYSGVVNDLLPFPTLAGSKYESHSVDLTNNTGFSAPGHKDNNNKRDEENPINNFIKPLQNSNAIDINNNQQAGVPIKQNLVNEVSVETCYDSPEVGDSYITQEEVGDDSSETSGADKKENLHTSIEEVAVEPVPKHMDLISVREKGSLEFPIHSESNSDSLDSGCEVLIRTKDNVDVNAGQNSCLIVEEISMNSSTSQLSSSQSLDEEESIKVSLFSESSDVVYEATHCILDEVSPNDSVSCESPVTKTEPLCFKSTLASDSLYSKPLRSYSFEIECCQNNSDKSLASSIESILEDIQLNDDPKLEESCDLKLEESCDLKLEQSCVFVDDSELYAVSSRAQKLRSYKKRIKDAFASKKRLAKEYEQLAIWYGDTDIEPSQGSSQILLPFGSRKYMDSKNLQVQQASETEWELL 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01488 463 Coils Coil 393 413 - -
Cca04g01488 463 PANTHER BNAA05G11610D PROTEIN 1 169 - -
Cca04g01488 463 PANTHER BNAA05G11610D PROTEIN 290 463 - -
Cca04g01488 463 MobiDBLite consensus disorder prediction 77 99 - -
Cca04g01488 463 MobiDBLite consensus disorder prediction 148 171 - -
Cca04g01488 463 PANTHER F3N23.33 PROTEIN 290 463 - -
Cca04g01488 463 PANTHER F3N23.33 PROTEIN 1 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01488 Cca-Chr4 20925507 20931152 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01488 04 20925507 20931152 Cca04g01488 04 20925507 20931152 ECH