Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01487 ATGTTGGTAACAAAAGTTAAAACACTAGCAGTTTTCAATTCCTTCAACCACCCCATGTCATTGATTGATCGCAGGATCCAATCCCTCTTCCCAATTGTGTTGTATTCAATTCTAATCCTAGGAAGTGCAAGGTTGGTCCTAGATAGTTTGAAGATCCACCATAGCCTTGTTTTGAGGCTCTATGGCATGCCCTATGGTGGAAGAAGTGGATTACCAGTTGTGGTTTTGCCAGAGGATCGCATTGGGGAAGATTGCAATGTGTTTGAAGGGACATGGGTTTGGGACAATGTGTCCTATCCTCTTTATGAAGAAGAGAGTTGCCCTTACTTGGTTAAGCAAACCACTTGCCACAAGAATGGGAGACTTGATTCTTTCTACAAGAATTGGAGGTGGCAGCCTAATGGATGCAACCTCCCCAGATTTGACGCTTTGAAGTTGTTGCACATGTTGAGGGACAAGAGAATGATGTTTATTGGAGACTCGTTACAAAGAGGCCAATTTGAGTCTATGATCTGTCTGATACAATCAGTAATTCCTGAAGGAAAGAAATCCCTCCAAAGAATTCCTCCAATGAAGATCTTCAAAATTGAGGAGTTCAATGCATCGATTGAGTACTATTGGGCTCCATTCATTGTGGAATCCATTTCAGATCATGCAACAAATCACACGGTACATAAACGAATGGTCAGACTAGACTCCATAGATAACCATGGCAAACATTGGAAAGGAGTGGACTTTTTGGTGTTCGAGAGTTATGTTTGGTGGATGCACAAACCTTTGATCAATGCTACATATGGATCGCCACACCAAGTCAAAGAATATAATGTTACCACAGCTTATAAATTGGCTTTGGAAACATGGGCAAATTGGTTAGAATCTAACATAAAACCGCTGACTCAGAAGGTGTTTTTCATGAGTATGTCTCCTACACATCTGTGGAGCTGGGAATGGAAACCTGGCAGCAATGAAAACTGTTTCAATGAGTCACACCCAATCCAAGGTCCATACTGGGGTACAGGCTCAAATCTTGAGATTATGAAGATATTACATGATGCACTACAAGTACTGAAAATAGATGTCACCCTTTTGAACATCACACAATTATCCGAGTACAGAAAAGATGCTCACACATCAGTTTATGGGGAGAGAAAAGGCAAGCTCTTGACAAAAGAACAGAGAGCCAACCCAAGAGATTTTGCTGATTGCATTCACTGGTGCCTACCTGGAGTCCCTGATGCATGGAATGAAATCTTATACGCATATCTGTTCAAGAATTACCAAAACTTCTCATGA 1293 0.413 MLVTKVKTLAVFNSFNHPMSLIDRRIQSLFPIVLYSILILGSARLVLDSLKIHHSLVLRLYGMPYGGRSGLPVVVLPEDRIGEDCNVFEGTWVWDNVSYPLYEEESCPYLVKQTTCHKNGRLDSFYKNWRWQPNGCNLPRFDALKLLHMLRDKRMMFIGDSLQRGQFESMICLIQSVIPEGKKSLQRIPPMKIFKIEEFNASIEYYWAPFIVESISDHATNHTVHKRMVRLDSIDNHGKHWKGVDFLVFESYVWWMHKPLINATYGSPHQVKEYNVTTAYKLALETWANWLESNIKPLTQKVFFMSMSPTHLWSWEWKPGSNENCFNESHPIQGPYWGTGSNLEIMKILHDALQVLKIDVTLLNITQLSEYRKDAHTSVYGERKGKLLTKEQRANPRDFADCIHWCLPGVPDAWNEILYAYLFKNYQNFS 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01487 430 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 138 420 IPR026057 GO:0016740
Cca04g01487 430 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 24 424 IPR029962 GO:0016413
Cca04g01487 430 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 31 24 424 - -
Cca04g01487 430 Pfam PMR5 N terminal Domain 84 137 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01487 Cca-Chr4 20921774 20925230 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01487 04 20921774 20925230 Cca04g01487 04 20921774 20925230 ECH