Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01384 ATGATAAAGGAATTCAACACCCAAACAGAGATCAGTGTTGGATTGGAAGCCCTCTGGGCAGCTCTGTCCAAGGATTTCATAAACATAGTTCCAAAGGTACTCCCAAATATTGTGAAAGATGTGCAACTCATTGAAGGTGATGGAAGGGTTGGTACAATCCTCATCTTCAATTTTTTGTCTGATATATCCCCAAGTTACCAGAGGGAGAGGATCACAGAGTTTGATGAGATTTCACATGAAATTGGGCTGCAAGTGATTGAGGGAGGTTATCTGAGTCAAGGATTGTCATACTACAAAACAACTTTTCAATTATCTTCAATTGAAGAGCAAAAGACTTTGGTCAAGGTGAAAATCTCTTATGACCATGAATCCGACATAGAAGAAAGGGTCCAACCTACCAAGACATCAGATTCCACTATACTCTATCTTAGACGCCTAGAAAAATATCTGCAGTTAAATGGTGCTTGA 468 0.3953 MIKEFNTQTEISVGLEALWAALSKDFINIVPKVLPNIVKDVQLIEGDGRVGTILIFNFLSDISPSYQRERITEFDEISHEIGLQVIEGGYLSQGLSYYKTTFQLSSIEEQKTLVKVKISYDHESDIEERVQPTKTSDSTILYLRRLEKYLQLNGA 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01384 155 PRINTS Major pollen allergen Bet V1 signature 2 22 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Cca04g01384 155 PRINTS Major pollen allergen Bet V1 signature 25 35 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Cca04g01384 155 PRINTS Major pollen allergen Bet V1 signature 49 58 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Cca04g01384 155 PRINTS Major pollen allergen Bet V1 signature 65 84 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Cca04g01384 155 PRINTS Major pollen allergen Bet V1 signature 84 97 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Cca04g01384 155 PRINTS Major pollen allergen Bet V1 signature 109 125 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Cca04g01384 155 PRINTS Major pollen allergen Bet V1 signature 142 152 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Cca04g01384 155 CDD Bet_v1-like 3 150 - -
Cca04g01384 155 PANTHER - 3 151 - -
Cca04g01384 155 Pfam Pathogenesis-related protein Bet v 1 family 3 149 IPR000916 GO:0006952
Cca04g01384 155 SUPERFAMILY Bet v1-like 5 151 - -
Cca04g01384 155 PANTHER PHYTOHORMONE-BINDING PROTEIN 3 151 - -
Cca04g01384 155 Gene3D - 1 153 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01384 Cca-Chr4 18053119 18054616 Proximal