Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01381 ATGACAAAGGAATTCAGCAACAAAGCAGAGGTAAGTGTAGGGTTGAAAACCTTGTGGCAAGCCCTGTCCAAGGATTTGGCTGTCATAATTGCAAAGGCTATACCAACTATTGTGAAAGATGTGAAAGTGGTCCAAGGCGATGGAGGGGTTGGCACAATCTTCCACTTCACTTTCTTCTCTGGTGTGTCCCCCGTAAGTTACCAGAAGGAGAAGATCACAGAGCTTGATGAAATTTCCCATGAATTTGGGCTGCAAGTGGTTGAAGGGGGCTATCTGAATCAAGGTTTCTCTTACTACAAGACAAGTTTTCAACTTTCTGCATTGGAAGAGCATAAGACTTTGGTCAACGTGAAGATCTCTTTTGACTATGAGTCGGACACAGAAGAAAGCACTCAACCAATGAAGACAGCAGAGTCTGCTTTATTCTTTGTTAGATGCCTAGAAACATATCTGTTGAGTGATGCTTAA 468 0.4274 MTKEFSNKAEVSVGLKTLWQALSKDLAVIIAKAIPTIVKDVKVVQGDGGVGTIFHFTFFSGVSPVSYQKEKITELDEISHEFGLQVVEGGYLNQGFSYYKTSFQLSALEEHKTLVNVKISFDYESDTEESTQPMKTAESALFFVRCLETYLLSDA 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01381 155 Pfam Pathogenesis-related protein Bet v 1 family 8 153 IPR000916 GO:0006952
Cca04g01381 155 PANTHER PHYTOHORMONE-BINDING PROTEIN 3 154 - -
Cca04g01381 155 PRINTS Major pollen allergen Bet V1 signature 25 35 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Cca04g01381 155 PRINTS Major pollen allergen Bet V1 signature 49 58 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Cca04g01381 155 PRINTS Major pollen allergen Bet V1 signature 66 85 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Cca04g01381 155 PRINTS Major pollen allergen Bet V1 signature 85 98 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Cca04g01381 155 PRINTS Major pollen allergen Bet V1 signature 143 153 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Cca04g01381 155 PANTHER - 3 154 - -
Cca04g01381 155 CDD Bet_v1-like 3 151 - -
Cca04g01381 155 Gene3D - 1 155 IPR023393 -
Cca04g01381 155 SUPERFAMILY Bet v1-like 4 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01381 Cca-Chr4 18042440 18043431 Dispersed/Proximal