Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca01g00091 ATGGGTTCATTCCAGACACCAATTGGAATGAGAAGTTCCACATTGCTAGAGACTTCATGTGGATTCCTGTTACAGGAACTGCAGATAATATGGGATGAAGTTGGAGAAGATAAGTTTGAAAAGGAGAAGGTTCTGCTAGATTTGGAGCAAGAATGTCTTGAGGTTTACAGAAGAAAAGTTGACAGAGCAAATATATCTAGAGCTCGTCTGCATCAGGAATTGGCAGAGGCTGAGGCTGAATTTACCCACCTTCTTTTGTCCCTTGGTGAACGATCTCTACCTGGACGGCCGGAGAAAAGGGCAGGCACACTAAAAGAGCAGCTAGATTCAATCACTCCAGCACTCCGGGAAATGCGCTTGAGGAAAGAAGAGAGGTTAAACCAATTCCGAGCTGTGCAAGGTCAAATTCAAAAAATTTCTGCAGAAATTGCAGGAAACTCAGACAATGAAGCCTCAACCATTGTGGTAAATGAAAATGATCTTTCACTAAAAAGACTTGAGGAGTATCAGAATGAGTTGCAAAGACTTTACAATGAGAAGAATGAAAGACTCCAGCAAGTGGAGAAATACATTGACATAATACACAGCTTGTCCACGATCTTGGGAAAGGATTCTTCTGCAATCATTATGGAAGTTCATCCAAGCTTAAATGATTTGTGTGGAATAACAAAAAATATAAGTGACACCATCCTAGATAAACTCAATATCACAGTAGAGTCCCTTTTCGAAGAAAAGCAAAATCGGCTGGACAAGCTTCACCATTTAGGCAAAGCACTGTCTAATCTATGGAATCTTATGGACACACCATACAGTGAACGGCAATCTTTCTCCCATGTAATCAATTTGTTGTCACTCTCATCTGCAGAAGTCACAGATCCTGGAAGTCTTACTCTAGAAATAGTCCAGCAGACTGAGGCTGAAGTAAAGAGACTGGATCAACTAAAAGCAAGCAAGATGAAGGAGCTATTCCAGAAGAAGCAGGAGGAACTTGAATTGATATGCAAGAAATCACATGTAGAGATCCCTTCAAGGGAAGAGATGAACAATATAATTAACCTCATAAACTCAGGGGAGATTGACCATTCCGATCTCCTCCTGAGCATGGATGAACAGATATCAAGAGCAAAAGAAGAGGCTTCTAGCAGGAAGGCTATCATGGAGAAAGTGGAGAAGTGGATGTTAGCACGTGATGAGGAGCGCTGGCTAGAAGAATATAGCATGGATGAAAATCGATACTCAGTCAGTAGAGGAGCTCACAAAAACTTAAGACGTGCTGAACGTGCCCGTATAATGGTCAGCAGAATGCCAGCTTTGGTAGATTTGCTAATAAAAATGACTAGGAGTTGGGAAGAAGAAAGAAATAAAGTTTTCTTGTATGATCAGGTACCTCTAATGGCCATATTGGAAGAATATAACATACTAAGGCAGGAAAAGGAGGAGGATGCAAAAAGACAGCAGCCGTGGGAAAAAAAGAGGATTCAAAGGCAAGTAGTTGAGCGAGATAATACTTATGTGTCAAGACCCGGCACCAGCAGTAGGCGTCTTCCAAGTAGAAGCTTGAATGGAGCTCTAGACAGTTCTGTGTCGCTGAACAGAAGGCTTTCTATGGGTATGCAACAGCTGGGATCAAACAGCATAAATTCAGGAAATCACAGCATGTCCTTCATCAAGGATGGAAGGAATGCGTTAAGAAAAAAGATTTTCATCGAACCTGTCTTCACTTCTCATACAAGAGATGAAGCATCTTCTGCTGTGTCAACACATTCTGCACCATTTTCCCCTTAA 1785 0.4157 MGSFQTPIGMRSSTLLETSCGFLLQELQIIWDEVGEDKFEKEKVLLDLEQECLEVYRRKVDRANISRARLHQELAEAEAEFTHLLLSLGERSLPGRPEKRAGTLKEQLDSITPALREMRLRKEERLNQFRAVQGQIQKISAEIAGNSDNEASTIVVNENDLSLKRLEEYQNELQRLYNEKNERLQQVEKYIDIIHSLSTILGKDSSAIIMEVHPSLNDLCGITKNISDTILDKLNITVESLFEEKQNRLDKLHHLGKALSNLWNLMDTPYSERQSFSHVINLLSLSSAEVTDPGSLTLEIVQQTEAEVKRLDQLKASKMKELFQKKQEELELICKKSHVEIPSREEMNNIINLINSGEIDHSDLLLSMDEQISRAKEEASSRKAIMEKVEKWMLARDEERWLEEYSMDENRYSVSRGAHKNLRRAERARIMVSRMPALVDLLIKMTRSWEEERNKVFLYDQVPLMAILEEYNILRQEKEEDAKRQQPWEKKRIQRQVVERDNTYVSRPGTSSRRLPSRSLNGALDSSVSLNRRLSMGMQQLGSNSINSGNHSMSFIKDGRNALRKKIFIEPVFTSHTRDEASSAVSTHSAPFSP 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca01g00091 594 Pfam Microtubule associated protein (MAP65/ASE1 family) 23 519 - -
Cca01g00091 594 PANTHER 65-KDA MICROTUBULE-ASSOCIATED PROTEIN 8 8 594 - -
Cca01g00091 594 Coils Coil 301 321 - -
Cca01g00091 594 MobiDBLite consensus disorder prediction 499 523 - -
Cca01g00091 594 Gene3D - 372 506 - -
Cca01g00091 594 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 8 594 IPR007145 GO:0000226|GO:0008017
Cca01g00091 594 Coils Coil 159 190 - -
Cca01g00091 594 Coils Coil 53 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca01g00091 Cca-Chr1 923266 928721 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca01g00091 12 555 EF-hand Containing Proteins AT5G62250 37.726 7.06e-98 307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca01g00091 01 923266 928721 Cca01g00091 01 923266 928721 ECH