Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02235 ATGTCCTCCAAAGGAAAAGATATAGCTGAAGGATCATCAGCAGATCATCCTCCTCAGCACTCACAGCAGCAGCCGCCGCCTTTGAGTAGATATGAATCTCAAAAGAGGAGAGATTGGAACACTTTTGGTCAATACTTAAGGAACCAAAGGCCTCCTGTTGCACTTTCACAGTGTAATTCAAATCAAGTACTTGATTTCCTTAGGTATTTGGATCAGTTTGGGAAAACAAAAGTGCACGTTCAAGGGTGTATTTTTTTTGGTCAAGTCGAACCACCTGCTCCTTGTACTTGTCCTCTTAAACAAGCTTGGGGAAGCCTTGATGCACTCATTGGAAGACTAAGAGCTGCTTATGAAGAAAATGGAGGGTTACCAGAGACAAATCCTTTCGCTAGCGGCGCCATAAGACTTTACCTTCGCCAAGTTAGAGACTCTCAAGCTAAGGCTAGAGGGATCCCTTATAAGAAGAAAACGAAGAACAAGAAAAATGTTTTGAAGCCCAGTAGTAATGGAGACACCTCAAATTTACCAGCTATGCGGTAA 540 0.4278 MSSKGKDIAEGSSADHPPQHSQQQPPPLSRYESQKRRDWNTFGQYLRNQRPPVALSQCNSNQVLDFLRYLDQFGKTKVHVQGCIFFGQVEPPAPCTCPLKQAWGSLDALIGRLRAAYEENGGLPETNPFASGAIRLYLRQVRDSQAKARGIPYKKKTKNKKNVLKPSSNGDTSNLPAMR 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02235 179 PANTHER PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 2 175 - -
Car07g02235 179 MobiDBLite consensus disorder prediction 148 179 - -
Car07g02235 179 MobiDBLite consensus disorder prediction 15 30 - -
Car07g02235 179 ProSiteProfiles ALOG domain profile. 30 157 IPR006936 -
Car07g02235 179 PANTHER PROTEIN G1-LIKE2 2 175 IPR040222 -
Car07g02235 179 MobiDBLite consensus disorder prediction 1 33 - -
Car07g02235 179 MobiDBLite consensus disorder prediction 163 179 - -
Car07g02235 179 Pfam ALOG domain 21 143 IPR006936 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02235 Car-Chr7 32668473 32671760 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01978 01 44842607 44846193 Car07g02235 07 32668473 32671760 ECH
Car06g01949 06 19494165 19498990 Car07g02235 07 32668473 32671760 ECH
Car07g02235 07 32668473 32671760 Car01g00411 01 3224406 3229912 ECH
Car07g02235 07 32668473 32671760 Car06g00988 06 9616514 9619815 ECH
Car07g02235 07 32668473 32671760 Car07g02235 07 32668473 32671760 ECH