Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02143 ATGCCTGAGGCACCTAAAGACTACAACCTTGTTGAACAGAACAAAAAAATCCTCGAGTTCATTGAGGATGTTACTTTAAACGCTGACCAAGTCCAACAAAAAGTCCTCTCAGAAATCCTCTCTCGCAATGCTAACGTTGAGTATCTTAAACGATATGGTCTCAATGGTCACACAGACCGTGACACCTTCAAAAAAATCTTGCCTGTTATTTCCTATGAAGATATTCAAACTGATATCAACCGCATCGCCAATGGTGACACCTCACCAATCCTTTGCTCCAAACCCATTTCTGAATTTCTCACTAGTTCTGGGACTTCAGGAGGTGAGAGAAAGCTGATGCCAACAATTGAAGAAGAGTTGGCGAGAAGGAGTTTGTTGTATAGTTTATTGATGCCAGTGATGAGCCAGTTTGTTCCTGGTTTAGAAAAAGGGAAAGGAATGTACCTAATGTTTATAAAATCTGAGGCTAAAACACCTGGAGGTATTGTAGCTAGGCCAGTTTTAACTAGCTATTACAAAAGTTCCCATTTTAGAGATAGACCTTATGACCCTTACACAAACTACACTAGCCCAAATGAAACTGTCCTCTGTCCTGATTCCTACCAAAGCATGTATTCACAACTGCTTTGTGGTCTTTGTCAAAACAAAGAGGTTTTAAGGGTTGGTGCTGTTTTTGCCTCTGGTTTCATAAGGGCTATTAGGTTCCTTGAAAAACATTGGACTCTTCTTGTCAATGATATTAGAACAGGTACTGTTAACCCTTTAATCACTGATTCTTCAGTGAGAGATTCTGTTATGAAGATCCTTAAACCTGATCCTAAACTTGCTGATTTTATTCAAACTGAGTGTAGTGAGAGTTCTTGGCAGGGGATAATTACTAGGTTGTGGCCTAATACTAAGTATGTTGATGTTATTGTGACAGGAACAATGTCACAGTATATTCCTATATTGGATCATTATAGTAATGGATTACCACTTGTTTGTACTATGTATGCTTCTAGTGAATGTTACTTTGGTGTTAACCTTAACCCTCTTTGTCAACCTAGTGAAGTTTCTTATACACTTATACCTACCATGTGTTACTTTGAGTTTTTACCTGTTAATAGAAGTAATGGTGTCACTGATTCTCTTCATACACCTAGATCACTTAATGAGAAAGAGCAACAAGAGTTGGTTGAACTTGTTGATGTCAAACTTGGTCAAGAATATGAACTTGTTGTCACTACTTATGCTGGACTATATCGTTATCGGGTAGGCGATGTGCTGAAAGTAGCAGGATTCAAGAACAAAGCACCACAATTCAACTTTGTATGCAGAAAAAACGTTGTGTTAAGCATTGATTCAGACAAAACTGATGAAGTTGAGCTTCAAAATGCAATGTCAAATGCAATGACACATTTAGTACCCTTCGACGCAACCGTTTCAGAATACACAAGCTATGCAGACACCACAACAATCCCAGGCCACTATGTCCTATACTGGGAACTCACCTTAAACGGATCAACACCAATTCCACCTTGTGTTTTTGAAGATTGCTGCCTAACAATAGAAGAGTCTCTCAACAGCGTTTATCGACAAGGCCGCGTCTCAGACAAATCAATAGGTCCACTTGAGATAAAGATTGTGGAACAGGGCACATTTGATAAGCTTATGGATTATGCAATTAGTTTAGGTGCATCAATAAATCAGTACAAGACACCAAGGTGTGTGAAGTTTGCACCTGTTGTTGAGCTCTTGAACTCAAGGGTAATGTCAAGCTATTTTAGTCCTAAGTGTCCAAAATGGGTTCCTGGTCACAAACAATGGATCAATCAGAATTGA 1821 0.3899 MPEAPKDYNLVEQNKKILEFIEDVTLNADQVQQKVLSEILSRNANVEYLKRYGLNGHTDRDTFKKILPVISYEDIQTDINRIANGDTSPILCSKPISEFLTSSGTSGGERKLMPTIEEELARRSLLYSLLMPVMSQFVPGLEKGKGMYLMFIKSEAKTPGGIVARPVLTSYYKSSHFRDRPYDPYTNYTSPNETVLCPDSYQSMYSQLLCGLCQNKEVLRVGAVFASGFIRAIRFLEKHWTLLVNDIRTGTVNPLITDSSVRDSVMKILKPDPKLADFIQTECSESSWQGIITRLWPNTKYVDVIVTGTMSQYIPILDHYSNGLPLVCTMYASSECYFGVNLNPLCQPSEVSYTLIPTMCYFEFLPVNRSNGVTDSLHTPRSLNEKEQQELVELVDVKLGQEYELVVTTYAGLYRYRVGDVLKVAGFKNKAPQFNFVCRKNVVLSIDSDKTDEVELQNAMSNAMTHLVPFDATVSEYTSYADTTTIPGHYVLYWELTLNGSTPIPPCVFEDCCLTIEESLNSVYRQGRVSDKSIGPLEIKIVEQGTFDKLMDYAISLGASINQYKTPRCVKFAPVVELLNSRVMSSYFSPKCPKWVPGHKQWINQN 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02143 606 Pfam GH3 auxin-responsive promoter 21 571 IPR004993 -
Car07g02143 606 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 7 603 IPR004993 -
Car07g02143 606 PANTHER BNAC03G14570D PROTEIN 7 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02143 Car-Chr7 28123423 28126694 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02143 9 589 EF-hand Containing Proteins AT1G23160 48.136 0.0 570