Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car07g02138 ATGGCAGAAGAACAATTTCAAGGAAGTGGAAATTGGTGGGAGACTCCAGCTAGAAACATGAGGTTTGAAAGTTGGcaacaacaacaacaacaacatcaTGATACTATGTCTGCTTCAGGTAGTTCCTCTGTGGTTTTCCATGATACCCTTAAACTTCAACCTTCAGATTCTTCAAATTCCAACAATGACTCCAACTTGCATATGATGGATTTGGGACTTTCATCTCAAACCATTGATTGGAATCAAGCATCTTTATTAAGAGGTGAAAAATCTTCAGAGGGAAGTTTCAGGTCCATGCTACAAGAAAATTTAAACTCATCAAACACAAATTTTCAACAAGAAAATGAAGGAGTTAGAGTTGGATTGTCACATCAAGTTAATTGGAAACAAGAAAAGTTGTTTTCAACAGAATCTTCTAACAATGAATTCAAGCAAGTGAATAGAGGTTTTTCATTAGATCAAACACAGTTTAGTCCTCAATATAGTTCTGAAGAAAGTAACATGATAAGCCAAGGTTTATCAGCTTGTAGTAGTACTACTTTTCAAATTGATTCTTCAACTATATATGGTAACTCTTCAATGTTACAAGGACTTTTAGGAAATGAAACAAATCAAATTCAACAACAACAAGCTATGAATTTTCCATACTCAACAAGCTATGGTTTGACTACAAATGAGTTAATGCCTTCTTGGTCTAAAGTAACTCATCAAAAACAACAACCACAAAATAACCAATTGCATTTCACAAATAATGCTCCCTTTTGGAATGCTTCAGAGGGTACTATTAAGGATGCTCCATCTAGCTTCTTGCCTCCATTTGCCACACCGATTTTTGGTACACCCCAACCAAAGAATATATCTGAAGGTAGAGACTCAAGTAGTGTGGCGAAGAAAAGTGGTAGTGAGCCTGCACCCAAAAGGCCTAAAAATGAAACCCCATCACCTTTGCCAGCTTTTAAGGTGAGAAAAGAGAAGATGGGGGACAGAATCACTGCACTCCAACAATTGGTTTCACCTTTCGGAAAGACTGATACAGCCTCAGTGCTCTCTGAAGCAATTGAATATATCAAATTCCTCCATGAACAAGTGACTGTTTTAAGCACCCCATATATGAAAAGTGGAGCTCCTATACAGCATCAACAGAATTCTGGTAAATCTAAGGAAACAGAGGGTCCAAAACAGGATCTTAGAAGCAGAGGGCTATGCTTGGTACCAGTTTCTAGTACATTTCCAATGACTCATGAACCAACTGTTGAATATTGGACACCAACATTTGGTGGAACTTTCAGATAA 1293 0.3681 MAEEQFQGSGNWWETPARNMRFESWQQQQQQHHDTMSASGSSSVVFHDTLKLQPSDSSNSNNDSNLHMMDLGLSSQTIDWNQASLLRGEKSSEGSFRSMLQENLNSSNTNFQQENEGVRVGLSHQVNWKQEKLFSTESSNNEFKQVNRGFSLDQTQFSPQYSSEESNMISQGLSACSSTTFQIDSSTIYGNSSMLQGLLGNETNQIQQQQAMNFPYSTSYGLTTNELMPSWSKVTHQKQQPQNNQLHFTNNAPFWNASEGTIKDAPSSFLPPFATPIFGTPQPKNISEGRDSSSVAKKSGSEPAPKRPKNETPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTVLSTPYMKSGAPIQHQQNSGKSKETEGPKQDLRSRGLCLVPVSSTFPMTHEPTVEYWTPTFGGTFR 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car07g02138 430 MobiDBLite consensus disorder prediction 280 299 - -
Car07g02138 430 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 310 359 IPR011598 GO:0046983
Car07g02138 430 CDD bHLH_AtbHLH_like 316 367 IPR045239 -
Car07g02138 430 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 21 418 - -
Car07g02138 430 MobiDBLite consensus disorder prediction 374 397 - -
Car07g02138 430 PANTHER TRANSCRIPTION FACTOR BHLH123-LIKE ISOFORM X1 21 418 - -
Car07g02138 430 SMART finulus 321 365 IPR011598 GO:0046983
Car07g02138 430 MobiDBLite consensus disorder prediction 273 318 - -
Car07g02138 430 Gene3D - 320 382 IPR036638 GO:0046983
Car07g02138 430 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 320 377 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car07g02138 Car-Chr7 27793343 27798700 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car07g02138 87 430 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 44.529 3.92e-76 241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car07g02138 07 27793343 27798700 Car07g02138 07 27793343 27798700 ECH