Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01949 ATGTCCAGCAATCATGGTAAGGAATTACAAGAACCTGAATCATCAACCAATCAAGTAGCGACACTTAGCCGCTACGAATCTCAAAAGAGAAGAGACTGGAACACTTTTGGCCAATACTTGAAAACCCAAAAACCACCAGTTCCACTTGTTCATTGCAATTCCAACAATGTGTTGGATTTCCTTCGTTACTTAGACCAGTTCGGAAAAACTAAGGTTCATATACAAGGTTGTATGTTTTATGGAAACCCTGAACCACCTGCACCTTGTAGTTGTCCTCTTAGACAAGCTTGGGGAAGCTTAGATGCTCTTATAGGAAGACTTAGAGCTGCTTATGAAGAAAATGGTGGGTCCCCTCATACTAACCCTTTTGCAACTTCTTCTATTCGTCTTTATCTTAGGGAGGTTCGAGAGTGTCAAGCTTTGGCTAGAGGTATACCTTACAAGAAGAAAAAGAAAGGAACAACTCATGAATCTCCTAATGGAAAATGTGGCATATAA 498 0.4036 MSSNHGKELQEPESSTNQVATLSRYESQKRRDWNTFGQYLKTQKPPVPLVHCNSNNVLDFLRYLDQFGKTKVHIQGCMFYGNPEPPAPCSCPLRQAWGSLDALIGRLRAAYEENGGSPHTNPFATSSIRLYLREVRECQALARGIPYKKKKKGTTHESPNGKCGI 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01949 165 MobiDBLite consensus disorder prediction 1 24 - -
Car06g01949 165 PANTHER PROTEIN G1-LIKE2 2 157 IPR040222 -
Car06g01949 165 ProSiteProfiles ALOG domain profile. 24 151 IPR006936 -
Car06g01949 165 Pfam ALOG domain 15 137 IPR006936 -
Car06g01949 165 PANTHER PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 2 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01949 Car-Chr6 19494165 19498990 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01949 06 19494165 19498990 Car01g01978 01 44842607 44846193 ECH
Car06g01949 06 19494165 19498990 Car07g02235 07 32668473 32671760 ECH
Car06g01949 06 19494165 19498990 Car06g01949 06 19494165 19498990 ECH
Car06g01949 06 19494165 19498990 Car01g00411 01 3224406 3229912 ECH
Car06g01949 06 19494165 19498990 Car06g00988 06 9616514 9619815 ECH