Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g01181 atgattgcaagtaaggatcTTCGTAACGGTGTTGCTGAGTCTGAAGGTGAGAACTCCAGAAGCAAGTTGTCAAGGCCCAATTTTGAGCCTAACAAGCGTTACCCAGATAAGAAAGATGCTGTATTTCTCAGAGATTCAGATATGGGTGCTGGTGGTGGTGTTCATGTTGATGGGCCCACCAAGGTTGTTGCTAGTAACTCAGGGTTACAAGAGCTTACCCTAAGTTACCTTTGTGGTAACCCAAAATTTGATCTTTCTGAGAAAGATACTCCTGATGAAAGTTTTCTGAATTCCTTTGAAAAAATGAGTCAAAAGGGTAAAGAGATTATGGTTTCTGAGAATTCAAATCAAGATGGAAAATGGGTTGAAAGAGATTTCCTCAGTTTGAGTGAAACAAGAGAGGATTCTTCAAAGAGATCTGTTGAAGAAGATGTTGAAAGAGAGAGAATTAGGGATAAAAAGCAAAAACTTGAGACATTGAATCTCTCTTTAGCTTTACCTGATGTTTCACTTTCTCTCACTGCTTCAAATGCTTTACACAACAATGGTGATCAACAACAAGTTAGGAACAAACCTACTCATACAtcttattcaaatgattatgcagcttctttgtcttattcttattcACACCCTTTTTCACATAACCCAAGTTGCTCTTTGACTCGCAATTCAACCGATAATTTCGATTATTCGATGAGCAAAGATGATCAAATTTGGAATTGTGGTGAAGGGACTAATGGTTCTGTTCATAGCAGGTTCAAACCAATAGGTGATGGTGTTGTTGCTTTGTCCAATCATGGTGGTGTTCTTAGTTCCTTCATGCAACAACAAGGTACTAATAATAATAGTCAGTATAAAACTACTAGTTCAGAAAATCATTCATTTTTTCCTTCTGAATTGCCTGCTAGACCTAGATTTGAAGCTCATTCAGGTGATTCTAGAGGAAGAAACTCTGAGAGTCTGAGAATCTTGGAAGGTGGTTTAGATGGTGGTAATAAGATGAGGAAGGTTTCAAGAATTGTGAGGGAAATTGTTTCAGAATCTATCCCTATTGTTTCATTGACAACTCAAGAGCTTGCTGATGAAGTCATAGCATCAACTAAGGAATACTTGAAGAATCTGATTGAGAAAAGTGACAAGAAAGAAGAATTGGTCAACCTTCAAAACAGGCTTGAAAGAAGGTCTGATCTTACCAAAGAGACTCTTTCAAAGTGCAACAAAGTTCAATTAGAGATTTTAGTTGCTGTCAAGATGGGACTTTCGAGCTTCTTATCCGGTAATCTTCAATTATCTGAGATGGTTGAGGTTTTCCTGTATAAGAGATGTAGAAATGTTACCTGCAAGAATTTACTTCCTGTCGATGATTGTGACTGTAAGATTTGTTCAGGAAATAAAGGGTTTTGCAGTTCTTGTATGTGTCCTGTGTGTCTGAACTTTGATTGTGCAAGTAACACTTGTAGTTGGATTGGTTGTGATGTTTGTTCTCATTGGTGCCATGCTGTTTGTGGCATCCAGAGGAAGCTCATCAAACCTGGACCTAGCTTGAAGGGTCCTTCGGGGACCTCGGAAATGCAGTTTCATTGTATTGGATGCGGACATGCTTCGGAAATGTTTGGGTTTGTTAAAGATGTTTTCATGTGTTGTGCAAAGGATTGGGGACTTGAGACGTTGTTGAAAGAGCTTGATTGTGTGAGGAGGATTTTCATGGGAAGCGAAGATTGCAAAGGGAAGGAATTGCATTTTAAAACCGATGACTTGCTATTAAAGCTTCAAACTAAAATAGTATCTCCTTCAGATGCCTGCAATTACATCATGCAATTTTTCAGCTATGCTGACAACATGTCGAACTTTCCCGCTTCTGGTTTTTCTTCAAAGGAACTGGCATCCACTCAAGCCAACCTTCCAAAAGACATACTATCTCTTCCAAAATCTAGTTCTTCAATACCGAAATACTCATATGACTCGAGCTATTCTAGGCCACCACATTCTGGTTCCTCGTCAAAAGACCTCAAAGCTTCCATCTTAAGTGAACTGAAAAACGATGCTGATCTCCAATTGGCTGCTTTACTAAGCAAAGGTGGAATTGAAAGTTTGGAGAGCATTGTGCGGATAAAGGAGGCGGAAGCGCGGATGTTTCAAACCAAGGCAGATGAAGCAAGGAGGGAGGCTGAAGGATTCCAGAAGATGATCAGGACAAAGACTGCACAGATGGAAGAAGAGTATGCTACAAAGCTTTCGAAACTCTGTCTGCATGAGACCGAGGAAACGCAGAGGAGGAAGTTGGATGAACTCAAAGTCGTGGAGCATTCGTATTTCGATTACTATAAAATGAAAAAGAGAATGCAAGATGAGATTGATGGTTTGTTGCAGAGAATGGAGGCAACAAAGCAGCAATGGGTTTAA 2406 0.3882 MIASKDLRNGVAESEGENSRSKLSRPNFEPNKRYPDKKDAVFLRDSDMGAGGGVHVDGPTKVVASNSGLQELTLSYLCGNPKFDLSEKDTPDESFLNSFEKMSQKGKEIMVSENSNQDGKWVERDFLSLSETREDSSKRSVEEDVERERIRDKKQKLETLNLSLALPDVSLSLTASNALHNNGDQQQVRNKPTHTSYSNDYAASLSYSYSHPFSHNPSCSLTRNSTDNFDYSMSKDDQIWNCGEGTNGSVHSRFKPIGDGVVALSNHGGVLSSFMQQQGTNNNSQYKTTSSENHSFFPSELPARPRFEAHSGDSRGRNSESLRILEGGLDGGNKMRKVSRIVREIVSESIPIVSLTTQELADEVIASTKEYLKNLIEKSDKKEELVNLQNRLERRSDLTKETLSKCNKVQLEILVAVKMGLSSFLSGNLQLSEMVEVFLYKRCRNVTCKNLLPVDDCDCKICSGNKGFCSSCMCPVCLNFDCASNTCSWIGCDVCSHWCHAVCGIQRKLIKPGPSLKGPSGTSEMQFHCIGCGHASEMFGFVKDVFMCCAKDWGLETLLKELDCVRRIFMGSEDCKGKELHFKTDDLLLKLQTKIVSPSDACNYIMQFFSYADNMSNFPASGFSSKELASTQANLPKDILSLPKSSSSIPKYSYDSSYSRPPHSGSSSKDLKASILSELKNDADLQLAALLSKGGIESLESIVRIKEAEARMFQTKADEARREAEGFQKMIRTKTAQMEEEYATKLSKLCLHETEETQRRKLDELKVVEHSYFDYYKMKKRMQDEIDGLLQRMEATKQQWV 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g01181 801 MobiDBLite consensus disorder prediction 306 320 - -
Car06g01181 801 PANTHER PROTEIN OBERON 3 1 801 - -
Car06g01181 801 Coils Coil 703 737 - -
Car06g01181 801 MobiDBLite consensus disorder prediction 280 325 - -
Car06g01181 801 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 356 378 IPR004082 -
Car06g01181 801 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 395 410 IPR004082 -
Car06g01181 801 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 434 455 IPR004082 -
Car06g01181 801 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 480 500 IPR004082 -
Car06g01181 801 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 553 572 IPR004082 -
Car06g01181 801 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 697 717 IPR004082 -
Car06g01181 801 PRINTS Arabidopsis thaliana 130.7kDa hypothetical protein signature 736 758 IPR004082 -
Car06g01181 801 MobiDBLite consensus disorder prediction 280 297 - -
Car06g01181 801 Coils Coil 375 398 - -
Car06g01181 801 PANTHER VERNALIZATION-INSENSITIVE PROTEIN 3 1 801 IPR004082 -
Car06g01181 801 Pfam Coiled-coil region of Oberon 672 790 IPR032535 -
Car06g01181 801 MobiDBLite consensus disorder prediction 647 669 - -
Car06g01181 801 CDD PHD_OBE1_like 473 532 - -
Car06g01181 801 Coils Coil 779 799 - -
Car06g01181 801 MobiDBLite consensus disorder prediction 1 58 - -
Car06g01181 801 MobiDBLite consensus disorder prediction 10 44 - -
Car06g01181 801 Pfam PHD - plant homeodomain finger protein 443 567 IPR032881 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g01181 Car-Chr6 11638422 11642473 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g01181 443 540 PHD Gene Family AT5G57380 28.571 2.81e-07 52.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g01181 06 11638422 11642473 Car06g01181 06 11638422 11642473 ECH