Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00988 ATGTCTTCTTCCCAAATTGAAAACACTTCtcttcatcatcatgcatcttcttcaacaaatcatcaacaacaacaaccacTAAGCAGATATGAATCTCAAAAACGTCGAGATTGGAACACCTTTGGTCAATATCTCAAAACTCAAAACCCACCAGTTCCACTATCTAACTGCAACTTCAACCATGTTCTTGATTTCCTCCGTTACCTGGATCAATTCGGAAAAACCAAAGTCCACTTGCACACTTGTATCTTCTTTGGCCAACCTACCCCACCTGCACCATGTGCTTGTCCTCTCAAACAAGCTTGGGGAAGTCTAGATGCACTCATCGGTCGACTCCGAGCCGCATACGAAGAGCACGGTGGATCACCGGAGACTAACCCTTTCGGTGGTGGACCTATTCGGGTTTACCTTCGTGAGGTTAAGGATAGTCAACAAAAAGCAAGAGGGATTCCATATaagaagaagaaaaagaagaagaagaGTTACCAAATTAAAGGGAGTAGTAGTATTACTACTACTCAAACTCAAACTGCCTGTGTCAAGCAACAAGATTCTTAA 558 0.3781 MSSSQIENTSLHHHASSSTNHQQQQPLSRYESQKRRDWNTFGQYLKTQNPPVPLSNCNFNHVLDFLRYLDQFGKTKVHLHTCIFFGQPTPPAPCACPLKQAWGSLDALIGRLRAAYEEHGGSPETNPFGGGPIRVYLREVKDSQQKARGIPYKKKKKKKKSYQIKGSSSITTTQTQTACVKQQDS 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00988 185 PANTHER PROTEIN G1-LIKE2 12 171 IPR040222 -
Car06g00988 185 MobiDBLite consensus disorder prediction 142 185 - -
Car06g00988 185 Pfam ALOG domain 21 142 IPR006936 -
Car06g00988 185 ProSiteProfiles ALOG domain profile. 29 156 IPR006936 -
Car06g00988 185 MobiDBLite consensus disorder prediction 164 185 - -
Car06g00988 185 MobiDBLite consensus disorder prediction 1 33 - -
Car06g00988 185 PANTHER PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 12 171 - -
Car06g00988 185 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00988 Car-Chr6 9616514 9619815 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00988 06 9616514 9619815 Car06g00988 06 9616514 9619815 ECH
Car01g00411 01 3224406 3229912 Car06g00988 06 9616514 9619815 ECH
Car01g01978 01 44842607 44846193 Car06g00988 06 9616514 9619815 ECH
Car07g02235 07 32668473 32671760 Car06g00988 06 9616514 9619815 ECH
Car06g01949 06 19494165 19498990 Car06g00988 06 9616514 9619815 ECH