Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00899 aTGGGTGGTAAGAAAAAGGGCCTCTTCTCCTTTCGCCGCCGCTCCCACAAGAAACTTCCCGTGCCGCCTCACTCTCCGCAGCCTACGCTCGAAATCTCCGGTTCCCCGTCGGATAACCGATTGGTCACGAAGGCCAAGAAAAAAACCGGCGGAGCGAGGCTATGGATGCGGTTCGACCGGTCCGGCCGCTCCGAACTTGTCGAGTGGGAGAAAAACACGATCATCCGCCACGCCGCAATTCCCGCCAGAGACCTAAGGATTTTAGGCCCTGTATTCTCCCAATCATCCAATATCCTCGCGAGAGAGAAAGCAATGGTGGTGAATTTGGAGTTTATAAAAGCAATAGTTACAGCTGAAGAAGTTTTATTGCTTGATCCTTTACGACAAGAGGTTCTTCCATTTGTTGAACAATTGAGGCAACAACTTCCACACAAAACTCAACCAAAACTTCTTGGAGGTGGTGGTGGTGATGAACAAGAGAGTGAAATGCAGGTTTCTAGTTCAAGGCAATGGTTGCCTGTGCCTGAGGCGACTGAAGGTTTACACTCTGAGCTTCCGCTACCTTTCGAGTTTCAGGTGTTGGAGATTGCTTTGGAAGTTTTGTGTACTTATCTTGATTCAAATGTGGCTGACCTTGAGAAAGGTGCTTATCCTGTTTTGGATGAATTGGCTAGGAATGTTAGCACCAAAAATCTTGAACATGTCAGAAGCTTGAAGAGTAATCTTACTCGTTTGCTCTCACGTGTGCAGAAGGTGCGAGATGAAATTGAACATTTATTAGATGACAATGAAGACATGGCTCAGCTATATTTGACAAGGAAGTGGTTGCAAAATCAACAACTTGAGGCTCATTTGGGAGCCACATCCTCGAATAACCTTTCAAATTCTGCACATGTTGTTCGACGACTTAGTTCTACCAGAAGTGCAAGTATTGTGACTAGCAACGATGATAATGATGTAGAGGACTTGGAGATGTTGCTTGAAGCGTATTTTATGCAGTTGGATGGAACTCGCAACAAGATATTGTCTGTTAGGGAGTATATTGATGACACTGAAGACTATGTCAACATCCAACTTGACAACCATAGGAATGAACTTATCCAGCTGCAGTTGACATTGACCATTGCATCATTTGCTATTGCTTTCGAGACTTTGATAGCTGGTGCATTTGGTATGAACATTCCATGTACATTATACAATCAAGATGGAATATTTTGGCCAATTGTTGCGGGTATGACTGCAGTTTCCATAGTGCTTTTCCTGCTTGTTTTAGCATATGCTAAATGGAAAAAGTTGCTGGGATCATAA 1308 0.4411 MGGKKKGLFSFRRRSHKKLPVPPHSPQPTLEISGSPSDNRLVTKAKKKTGGARLWMRFDRSGRSELVEWEKNTIIRHAAIPARDLRILGPVFSQSSNILAREKAMVVNLEFIKAIVTAEEVLLLDPLRQEVLPFVEQLRQQLPHKTQPKLLGGGGGDEQESEMQVSSSRQWLPVPEATEGLHSELPLPFEFQVLEIALEVLCTYLDSNVADLEKGAYPVLDELARNVSTKNLEHVRSLKSNLTRLLSRVQKVRDEIEHLLDDNEDMAQLYLTRKWLQNQQLEAHLGATSSNNLSNSAHVVRRLSSTRSASIVTSNDDNDVEDLEMLLEAYFMQLDGTRNKILSVREYIDDTEDYVNIQLDNHRNELIQLQLTLTIASFAIAFETLIAGAFGMNIPCTLYNQDGIFWPIVAGMTAVSIVLFLLVLAYAKWKKLLGS 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00899 435 CDD Mrs2_Mfm1p-like 55 432 IPR039204 -
Car06g00899 435 Pfam CorA-like Mg2+ transporter protein 248 423 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Car06g00899 435 Gene3D Magnesium transport protein CorA, transmembrane region 127 366 - -
Car06g00899 435 Gene3D - 41 126 - -
Car06g00899 435 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 371 422 IPR045863 -
Car06g00899 435 MobiDBLite consensus disorder prediction 1 20 - -
Car06g00899 435 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 12 435 IPR039204 -
Car06g00899 435 PANTHER MAGNESIUM TRANSPORTER MRS2-4-RELATED 12 435 - -
Car06g00899 435 MobiDBLite consensus disorder prediction 1 38 - -
Car06g00899 435 Gene3D Magnesium transport protein CorA, transmembrane region 373 430 - -
Car06g00899 435 Coils Coil 235 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00899 Car-Chr6 8772393 8775874 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00899 6 435 MRS2 Gene Family AT3G58970 65.996 0.0 547
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00899 06 8772393 8775874 Car06g00899 06 8772393 8775874 ECH
Car06g00899 06 8772393 8775874 Car05g02060 05 65848910 65850106 PCT