Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00246 ATGTTTTCAGTTTCGAATAATCATTTCGTAACCACTGGTCAGAATATGAATGGTTATAATGTGACGCTGCCACTACTCGGGGGAATACCTGTTACATTGCCTCAATCATCTCTTCCCACTGTTGGTGCTGTTGCTGGAATAACTGAATCATGCAATGTGAAACCGACTGGGCCTTCTTCCCGACTTACCATCTTCTATGCGGGTACTGTCAATGTCTTCGATGATATCTCTGCCGAGAAGGCACAAGCTATCATGTTGTTGGCTGGAAATGGCTTATCAATGGCTTCTAACATAGCACAGACAAAAGTTGCGGCACCTGGCTCGAAGTTGGCAGCTGGTGATGGTGTGCCTGTGAGTCAACATGCAAATACACCACCCTCCTCTGGTCATCCGAGTCCTATATCTATTTCATCGCATGCAGGTACACAATCAGGCTGCGGCTCAACTAGTAACGATGAATTTCTCGCAGTTAAAACAACTGGTGTTCTCGCCACTCTTGTTAGCAATCTGGAACTCCCAAAAGTAGTCAATGCTGCCACAATGTTGGCGTCTGCTGTACCTCAGGCTCGAAAAGCATCCTTGGCTCGATTTTTAGAAAAGCGCAAGGAAAGGGTGATGAATGCAGCACCGTATAACTTCAACAAAAAATCTGAAGAGTGTGCTGCCGCATAA 672 0.4583 MFSVSNNHFVTTGQNMNGYNVTLPLLGGIPVTLPQSSLPTVGAVAGITESCNVKPTGPSSRLTIFYAGTVNVFDDISAEKAQAIMLLAGNGLSMASNIAQTKVAAPGSKLAAGDGVPVSQHANTPPSSGHPSPISISSHAGTQSGCGSTSNDEFLAVKTTGVLATLVSNLELPKVVNAATMLASAVPQARKASLARFLEKRKERVMNAAPYNFNKKSEECAAA 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00246 223 Pfam Jas motif 187 211 IPR018467 -
Car06g00246 223 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 5 220 IPR040390 -
Car06g00246 223 Pfam tify domain 59 89 IPR010399 -
Car06g00246 223 ProSiteProfiles Tify domain profile. 55 90 IPR010399 -
Car06g00246 223 MobiDBLite consensus disorder prediction 110 145 - -
Car06g00246 223 MobiDBLite consensus disorder prediction 120 145 - -
Car06g00246 223 PANTHER PROTEIN TIFY 7 5 220 - -
Car06g00246 223 SMART tify_2 55 90 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00246 Car-Chr6 2562918 2566413 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00246 7 220 Tify Gene Family AT3G17860 39.474 6.13e-31 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Car06g00246 tify 9.9e-17 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00246 06 2562918 2566413 Car06g00246 06 2562918 2566413 ECH