Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00242 ATGGGTTCCGAAGGTTCCACCGTCGTTGTTCCTAGGAATTTCAGATTATTGGAGGAGCTTGAGCGAGGTGAGAAGGGAATTGGAGATGGGACTGTTAGCTATGGAATGGATGATGCTGATGATATATTCATGCAGTCATGGACTGGGACTATTATTGGCCCTCCTGGTACTGTTCATGAAGGTCGTATCTACCAGTTGAAATTGTTTTGTGGCAAGGATTATCCAGACAATCCACCATCTGTTAGATTCCAGACAAGGATTAACATGACTTGCGTCAACCAAGAATCTGGAATGGTTGAGCCACATTTGTTTCCCATGCTTTCTAATTGGAAAAGAGAGTCTACAATGGAAGATATTTTGTTGCAATTGAAGAAAGAAATGATGTCTCCACAAAACAGGAAGCTAGCTCAACCTCCTGAAGGCAATGAAGATGGAAGAATTGACCAAAAGGGGCTGGTGCTGAGATGTTGTATCGTGTAA 480 0.4271 MGSEGSTVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIFMQSWTGTIIGPPGTVHEGRIYQLKLFCGKDYPDNPPSVRFQTRINMTCVNQESGMVEPHLFPMLSNWKRESTMEDILLQLKKEMMSPQNRKLAQPPEGNEDGRIDQKGLVLRCCIV 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00242 159 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 8 144 - -
Car06g00242 159 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 VARIANT 1A-LIKE 8 144 - -
Car06g00242 159 SMART ubc_7 14 158 - -
Car06g00242 159 Pfam Ubiquitin-conjugating enzyme 41 135 IPR000608 -
Car06g00242 159 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 11 159 IPR000608 -
Car06g00242 159 SUPERFAMILY UBC-like 8 142 IPR016135 -
Car06g00242 159 Gene3D Ubiquitin Conjugating Enzyme 2 144 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00242 Car-Chr6 2524204 2527940 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00242 06 2524204 2527940 Car06g00242 06 2524204 2527940 ECH