Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00233 ATGGAGTCGAAGACTCTGCGTTTCATGACCCATCAATCAATTTTTTCCATGGTTGGATCTGGAGACCTTGATGGGTTAAAGAAGTTGGTGGAAGAGCTGAAGAAGGAGGATaatgataatgggtcgtcatcatcatcatcatcgatgtTGGTTTCTGATTTGATGTGTCTTCAGAATGAGCATGGAGAAACAACACTTTACATAGCTGCAGAGCGTAATTTGAAACAAGTTTTTAGCTTTTTGCTTCAATTGTGTGATTTTGAGGTTCTAAAGATTCGGTCCAAGTCTGATATGAACGCCTTTCATGTTGCTGCTAAGCGTGGCAATTTGGATATTGTGAGGGAGATTTTGAGTGTCTGGCCTGAGGTTTGTAAGTTATGCGACTCCTCAAACACCAGCCCCCTATATTCTGCTGCAGTTCAAGACCACCTGGATGTGGTGAGTGCTATTTTGGATATTGATGTCAGCTCCATGTTTATAGTCAGGAAAAACGGAAAAACAGCGCTACACAATGCTGTTAGGTACGGCGTCCTTCGAATTGTGAAAGCCCTTATTTCCCGGGATCCAGGAATTGTCTGCATCAAAGATAAAAAAGGTCAAACTGCATTGCATATGGCTGTCAAAGGACAGTGTACATCAGTGGTGGAGGAGATATTACAGGCTGATCCTACTATATTGAACGAACGAGATAAGAAGGGTAACACAGCTCTTCACATGGCTACGAGGAAAAGCCGTTCGCAGATAGTGATCCTTTTGCTAAGCTATGCATCTTTGGATGTTAATGCCATCAATAAGCAGCAAGAAACAGCCTTGGATTTAGCAGATAAACTTCCATATGGAACTTCAGCTTTAGAAATCCAAGAAGCCCTCGCAGAATACGGTGCCAAATATGCAAGACATGTTGGTAAAGTGGATGAAGCTATGGAACTTAAAAGAACAGTAAGTGACATAAAGCATGAGGTTCAGTCACAACTCATACAAAACGAAAAAACTCGGCGACGAGTTTCTGGCATAGCTAAGGAATTGAAGAAACTTCATAGAGAAGCCGTTCAAAACACCATTAACTCTGTCACAGTGGTCGCAGTCCTTTTCGCCTCAATAGCATTCTTGGCTATATTCAATTTGCCCGGTCAATATATAACTAAAGGATCAGAGACAGGAAAATCTAACATAGCTGATCATGTAGGATTCCAAGTTTTTTGTCTCTTGAATTCTACCTCTCTTTTCATTTCTCTTGCAGTTGTTGTTGTTCAAATCACTTTGGTAGCTTGGGACACAAGAGCTCAAAAGCAGATTGTATCGGTCGTTAACAAGCTGATGTGGGCTGCTTGTGCTTGCACGTGTGGCGCTTTTCTTGCGATAGCTTTTGAGGTTGTTGGAAAGAAAAAATGGATGGCAATCACCATAACTGTTGTAGGGACACCAATTTTAGTTGGGACTCTAGCAAGCATGTGTTACTTTGTTTTTCGACAACATTTTGGGACTTTCCGCAGCGATTCTCAGAGACGAATCAAGAGAGCAAGTGGAAGTAAATCTTTCTCATGGTCTTACTCTGCAAATATATCGGATTTGGATGATGAATACAATTCAGACATTGAGAAGATCTATGCTTTGTAA 1617 0.4038 MESKTLRFMTHQSIFSMVGSGDLDGLKKLVEELKKEDNDNGSSSSSSSMLVSDLMCLQNEHGETTLYIAAERNLKQVFSFLLQLCDFEVLKIRSKSDMNAFHVAAKRGNLDIVREILSVWPEVCKLCDSSNTSPLYSAAVQDHLDVVSAILDIDVSSMFIVRKNGKTALHNAVRYGVLRIVKALISRDPGIVCIKDKKGQTALHMAVKGQCTSVVEEILQADPTILNERDKKGNTALHMATRKSRSQIVILLLSYASLDVNAINKQQETALDLADKLPYGTSALEIQEALAEYGAKYARHVGKVDEAMELKRTVSDIKHEVQSQLIQNEKTRRRVSGIAKELKKLHREAVQNTINSVTVVAVLFASIAFLAIFNLPGQYITKGSETGKSNIADHVGFQVFCLLNSTSLFISLAVVVVQITLVAWDTRAQKQIVSVVNKLMWAACACTCGAFLAIAFEVVGKKKWMAITITVVGTPILVGTLASMCYFVFRQHFGTFRSDSQRRIKRASGSKSFSWSYSANISDLDDEYNSDIEKIYAL 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00233 538 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 2 538 - -
Car06g00233 538 ProSiteProfiles Ankyrin repeat profile. 232 265 IPR002110 GO:0005515
Car06g00233 538 Pfam Ankyrin repeats (3 copies) 101 187 IPR002110 GO:0005515
Car06g00233 538 ProSiteProfiles Ankyrin repeat region circular profile. 232 254 - -
Car06g00233 538 Gene3D - 3 157 IPR036770 -
Car06g00233 538 ProSiteProfiles Ankyrin repeat region circular profile. 164 187 - -
Car06g00233 538 SUPERFAMILY Ankyrin repeat 14 295 IPR036770 -
Car06g00233 538 Gene3D - 158 317 IPR036770 -
Car06g00233 538 Pfam Domain of unknown function 348 455 IPR026961 -
Car06g00233 538 Pfam Ankyrin repeats (many copies) 201 253 IPR002110 GO:0005515
Car06g00233 538 SMART ANK_2a 96 125 IPR002110 GO:0005515
Car06g00233 538 SMART ANK_2a 130 160 IPR002110 GO:0005515
Car06g00233 538 SMART ANK_2a 164 193 IPR002110 GO:0005515
Car06g00233 538 SMART ANK_2a 198 227 IPR002110 GO:0005515
Car06g00233 538 SMART ANK_2a 232 262 IPR002110 GO:0005515
Car06g00233 538 SMART ANK_2a 61 89 IPR002110 GO:0005515
Car06g00233 538 PANTHER ANKYRIN REPEAT PLANT-LIKE PROTEIN 2 538 - -
Car06g00233 538 Coils Coil 328 348 - -
Car06g00233 538 ProSiteProfiles Ankyrin repeat profile. 164 187 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00233 Car-Chr6 2467301 2470859 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00233 1 538 Miscellaneous Gene Families AT2G01680 68.831 0.0 741
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00233 06 2467301 2470859 Car06g00233 06 2467301 2470859 ECH