Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00232 ATGGCCGACGCTCTGTCGTCTATTCCGGCAGCCGTTCTTCGTAATCTTGCTGATAAGCTCTATGAGAAGCGCAAAAATGCTGCTCTTGAGATTGAGAATATAGTGAAGCAATTAGCTGCTAATGGAGATCATGATAAAATTGCGGCTGTTATCAATTTGTTGACTACGGAATACACTTATTCACCACAGGCCAATCATCGAAAGGGAGGATTGATAGGATTAGCTGCTGCAACTGTTGGGTTGACTTCTGAAGCAGCTCAGCATCTTGAGCAAATTGTGCCCCCTGTGCTAAATTCTTTCTCTGACCAAGATAGCAGAGTTCGTTATTATGCTTGTGAAGCACTATATAACATAGCTAAGGTTGTGAGAGGTGACTTTATTGTATTCTTCAACCAGATCTTTGATGCCTTATGCAAGCTTTCTGCAGACTCAGATGCAAATGTACAAAGTGCTGCTCACCTCTTAGACCGGCTTGTGAAGGATATTGTGACTGAAAGTGATCAGTTCAGTATTGAAGAATTTATACCACTGTTGAGGGAGCGCATGAATGTATTGAATCCATATGTCCGACAGTTTTTGGTAGGATGGATTACTGTATTGGACAGTGTTCCTGATATTGATATGCTGGGTTTTCTTCCTGATTTTCTTGATGGATTGTTTAATATGTTAAGTGATTCGAGTCATGAAATACGTCAACAAGCTGATTCAGCTCTTTCAGAGTTTCTTCAAGAAATTAAGAACTCTCCATCTGTAGATTATGGTCGAATGGCTGAAATACTAGTACAGAGGGCAGGTTCTTCAGATGAATTTACGAGGCTAACAGCTATCACATGGATAAACGAGTTTGTCAAACTTGGTGGAGACCAGCTTGTTCCATATTATGCAGACATTCTTGGAGCCATTTTGCCTTGTATATCAGATAAAGAAGAGAAAATTAGAGTTGTTGCTCGTGAAACCAATGAAGAGCTACGAGCCATCAAGGCTGATCCAGCTGAAGCATTTGATGTAGAGGCAATCCTCTCCATTGCCAGGAGGCAATTATCTAGTGAATGGGAGGCTACTCGAATTGAAGCTTTGCACTGGATATCTACCCTTTTAAATAACTATCGTACTGAGGTTTTGCAATTTCTGAATGACATATTCGACACCCTGCTCAAGGCACTTTCAGATTCATCTGATGAGGTTGTTCTTCTAGTTCTTGATGTTCATGCATGCATTGCAAAAGATCTTCAGCACTTTCGTCAGCTTGTTGTTTTCCTGGTGCACAATTTCCGGGTAGACAATACCCTTTTGGAGAAGCGTGGTGCTTTAATAATCCGCCGGCTTTGTGTGCTTTTGAATGCTGAGAGAGTCTACCGTGAACTTTCTACAATACTAGAAGGGGAATCTGATTTGGATTTTGCATTAATTATGGTTCAGGCTTTGAATTTGATCTTACTCACATCATCAGAACTATCTGAGATTAGAGTTCTTTTGAAGCAATCACTTGTAAATCCTGCCGGGAAGGATTTATATGTTTCTTTGTATGCCTCGTGGTGTCATTCTCCAATGGCGATTATAAGTCTTTGCTTCTTAGCTCAGACTTACCAACATGCGAGTGTTGTGATTCAATCTCTGGTAGAGGAGGATATTAATGTCAAGTTCCTTGTACAGCTGGATAAATTGATTCGTTTGCTGGAAACTCCTGTCTTTGCTTATCTTAGATTGCAGCTTCTGGAACCTGGAAGATATACATGGTTATTTAAAGCACTGTATGGTCTTCTGATGTTGCTTCCTCAGCAAAGTGCTGCCTTCAAGATACTACAAACTCGTTTAAAAGCCGTGCCATCATATTCTTTCAATGGTGAGCAATTGAAAAAAATATCCTCTGGGAACCCCTATCAATTTCTCCATCACATGTCTGGTGGATCTCAAATCACAGAGGATGGCGATGTATTCATGGACAGTGGAAACTCACACAATGGAATAAACTTTGTTGCAAGGCTACAACAGTTTCAGCAAATGCAGCAGCAGCATCGTGAACATTTTCGAACACAGGCACGGACACGCAGAAATTCCACCTCACTATTAAAGGAGGAGGCACAAAAACAAGAAGAACCAAGAAGACCTCATTTGAGTGAGCTTTATGTACCTCCAAGATCATCCAAGAGAGCTAGCTAG 2160 0.4097 MADALSSIPAAVLRNLADKLYEKRKNAALEIENIVKQLAANGDHDKIAAVINLLTTEYTYSPQANHRKGGLIGLAAATVGLTSEAAQHLEQIVPPVLNSFSDQDSRVRYYACEALYNIAKVVRGDFIVFFNQIFDALCKLSADSDANVQSAAHLLDRLVKDIVTESDQFSIEEFIPLLRERMNVLNPYVRQFLVGWITVLDSVPDIDMLGFLPDFLDGLFNMLSDSSHEIRQQADSALSEFLQEIKNSPSVDYGRMAEILVQRAGSSDEFTRLTAITWINEFVKLGGDQLVPYYADILGAILPCISDKEEKIRVVARETNEELRAIKADPAEAFDVEAILSIARRQLSSEWEATRIEALHWISTLLNNYRTEVLQFLNDIFDTLLKALSDSSDEVVLLVLDVHACIAKDLQHFRQLVVFLVHNFRVDNTLLEKRGALIIRRLCVLLNAERVYRELSTILEGESDLDFALIMVQALNLILLTSSELSEIRVLLKQSLVNPAGKDLYVSLYASWCHSPMAIISLCFLAQTYQHASVVIQSLVEEDINVKFLVQLDKLIRLLETPVFAYLRLQLLEPGRYTWLFKALYGLLMLLPQQSAAFKILQTRLKAVPSYSFNGEQLKKISSGNPYQFLHHMSGGSQITEDGDVFMDSGNSHNGINFVARLQQFQQMQQQHREHFRTQARTRRNSTSLLKEEAQKQEEPRRPHLSELYVPPRSSKRAS 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00232 719 MobiDBLite consensus disorder prediction 686 706 - -
Car06g00232 719 ProSiteProfiles HEAT repeat profile. 92 127 IPR021133 -
Car06g00232 719 SUPERFAMILY ARM repeat 3 541 IPR016024 -
Car06g00232 719 Coils Coil 17 37 - -
Car06g00232 719 Pfam Vacuolar protein 14 C-terminal Fig4p binding 429 608 IPR021841 -
Car06g00232 719 Pfam Vacuolar 14 Fab1-binding region 65 161 - -
Car06g00232 719 Gene3D - 1 246 IPR011989 -
Car06g00232 719 MobiDBLite consensus disorder prediction 671 719 - -
Car06g00232 719 PANTHER PROTEIN VAC14 HOMOLOG 4 695 - -
Car06g00232 719 Gene3D - 247 416 IPR011989 -
Car06g00232 719 PANTHER TAX1 BINDING PROTEIN-RELATED 4 695 IPR026825 GO:0006661|GO:0070772
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00232 Car-Chr6 2459178 2466776 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00232 06 2459178 2466776 Car06g00232 06 2459178 2466776 ECH