Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00231 ATGTCGTGGGAAGACGAGATTGTGATTCGTGATGTTACGAATGCTGGTCTTGTTGTCAGTGATCGCATTGGCCGCGAAGTTTCGTCTCAGCACGACCTCGAAGAAGCTTTAGAGGCCTCTAGATATGCCAGTCATCCTTATTCTACTCACCCCAGAGAGTGGCCCCCTTTGGTTGAGGTAGCAAATACATGGGAGTTGCCTCCTGTTCTCATTGAAAGATACAATGCAGCTGGTGGGGAGGGGACCGCTTTTTGTGGCATATTTCCTGAAATACGCAGAGCATGGGCTTCCGTGGACAATTCCTTGTTTCTTTGGCGTTTTGATAAGTGGGATGGCCAGTGTCCTGAATATAGTGGGGAGGAACAAGCTATTTGTGCTGTTGGTCTTGCAAAATCAAAACCTGGTGTTTTTGTTGAAGCTATCCAATATCTTTTAATCTTAGCAACCCCTGTTGAGTTAATTATAGTTGGAGTTTGCTGCTCTGGAGGAGCAGATGGCTCAGATCCATTTGCAGAAGTTTCATTACAGCCATTGCCAGATTATACAATACCATCTGATGGTGTTACAATGACATCTGTAGCATGTACTGATAAGGGCCGCATTTTTCTTGCTGGTCGCGATGGCCACATATATGAGCTTCTATATTCAACTGGCTCAGGATGGCAAAAGCGCTGCAGAAAAATATGTGTCACGGCTGGTCTAGGAAGTGTAATTTCAAGATGGGTCATACCAAATGTGTTCAATTTTGGAGCTGTTGACCCTGTTGTTGAAATGGTTTTTGACAATGAGAGACAGATATTGTATGCACGTACTGAAGAGATGAAGCTTCAGGTTTATGTTCTTGGACCAATTGGTGATGGGCCATTAAAGAAAGTTGCTGAAGAAAGGAATCTTATCAATCAGAAGGATGCACATCACGGAGGTAGACAATCAAATGGATCAAGAGTATCAAGTCGATCACCAAAGGCCTCTATTGTTTGCATCTCACCTTTATCTACACTTGAGTCCAAATGGCTACATCTTGTTGCTGTTTTATCAGATGGCAGAAGGATGTATCTATCTACCTCTCCTTCTAGCGGAAGCCTGACTGGATTCAACACCACCCATCCTAAGCCTAGCTGTTTAAAGGTTGTCACAACAAGGCCTGCTCCTCCGTGGGGTGTTAGTGGTGGTCTCACCTTTGGAACCATGGCTCTTGCCGGTAGACCTCAGAATGACGATCTCTCACTGAAAGTCGAGGCAGCCTATTATTCTTCTGGAACTCTAATCCTTTCTGATGCATCACCTCCCACTATGCCTTCACTCCTGCTTTTAAACAGGGATTCTACCACCCAGTCATCAGCATCGGGTAATCTAGGGACAGGTACAAGGAGTTCTCGGGCATTACGGGAATCTGTATCTTCTTTACCAGTCGAAGGACGAATGCTTGCTGTGGCAGATGTTCTACCTCTTCCGGATACTTCAGCTACTGTGCAGTCTCTATATTCAGAAATTGAGTTTGGTGGTTATGAGAGCTCAATGGAATCGTGTGAAAGGGCGTCTGGTAAACTGTGGGCAAGGGGAGACCTCTCAACCCAACATATATTGCCAAGGAGGAGGATTGTCATCTTCAGCACTATGGGCATGATGGAAATTGTTTTTAACAGGCCACTAGACATTTTAAGGCGGCTGTTAGAGTCCAATTCTCCAAGATCAGTTTTAGAAGATTTCTTCAATCGTTTTGGAGCCGGCGAGGCAGCTGCAATGTGTTTAATGCTAGCTGCAAGGATAGTGCATTCTGAAAACCTTATCAGCAATGTTATTGCTGAGAAGGCAGCTGAAGCTTTTGAGGACCCACGACTTGTTGGCATGCCACAACTTGAAGGTAGTAATGCATTATCAAACACAAGAACTGCTGCCGGTGGATTTAGCATGGGCCAGGTTGTTCAGGAGGCTGAGCCTGTATTTTCAGGTGCACATGAAGGGCTCTGTTTGTGTTCATCTAGATTACTTTTTCCTCTATGGGAACTTCCTGTAATGGTTGTAAAAGGAAGTTTAGGTGCTTCAGGCACTTCATATGAAAATGGGGTAGTTGTATGCAGACTATCCATTGGGGCTATGCAAGTTCTTGAACTCAAACTTCGATCTTTAGAGAAATTCTTAAGATCTAGAAGGAACCAGAGGAGGGGACTTTATGGCTGCGTAGCAGGTTTAGGAGATCTGAGTGGTTCGATTCTATATGGTACTGGTTCTGCATTGGGTGCTGATGATCGAAGTATGGTAAGAAACTTGTTTGGTGCATATTCCAGAAATATGGAGTCCAATGGTGGTGGAGCCACAAATAAAAGGCAAAGGTTGCCATATAGTCCTGCAGAATTAGCTGCCATGGAGGTGAGGGCGATGGAGTGCATTAGGCAGTTGCTCCTTAGATCCGGTGAAGCTCTCTTTTTGCTTCAACTTCTTTCACAGCATCATGTCACTCGTCTGATCCAGGGATTTGATGCTAACCTTCAACAAGCCTTAGTTCAGTTAACATTTCATCAACTAGTGTGTTCTGAGGAGGGTGACCGTCTCGCTACAAGACTTATATCTGCTCTAATGGAGTATTATACTGGTCCAGATGGCAGAGGAACTGTAGAGGACATTAGCAAGAGATTAAGAGAGGGTTGTCCAAGCTACTATAAGGAGTCTGACTACAAATTCTTCTTAGCTGTGGAAGCCCTGGAGAGAGCTGCGGTGACTATAGATGATGAGGAAAAGGAGAATCTTGCGCGGGAGGCACTGAATTCCTTAAGCAAAGTTCCAGAGTCTGCGGACTTACGTACCGTTTGCAAACGTTTTGAGGATTTAAGGTTTTATGAAGCTGTAGTGTGCTTACCTCTTCAGAAGGCACAGGCTATTGATCCTGCAGGTGATGCTTATAATGATGAAATTGATGCAACTGTCAGAGAACAAGCACTTGCTCGGCGTGAGCAGTGTTATGAGATAATTATCAGTGCTTTGCGGTCTCTTAAAGGTGACACCTTGCGGAAGGAATTTGGCTCTCCCATTAGATCTGCTTCACAATCTGCACTCGATCCAGCCTCTCGGAAAAAGTATATCAGCCAAATCGTTCAGCTGGGTGTCCAATCACCTGACAGAATTTTCCATGAGTATCTCTACCAGGCTATGATTGATTTAGGCCTTGAGAATGAATTGTTAGAGTATGGAGGCCCTGACCTGTTGCCATTTTTACAAAGTGCTGGTCGTAAAACCATACACGAGGTCCGTGCTGTGACTGCAACAACTTCTCCAATGGGGCAATCGGGAGCGCCCATGTCATCTAATCAAGTCAAGTACTATGAACTTTTGGCACGGTATTATGTCTTGAAACGACAACACATGCTTGCTGCTCATGCATTGCTAAGACTAGCTGGAAGGCCTTCTATTGATGGAGTTCCTACTCTTGAGCAGAGGTGTCAATACCTAAGCAATGCAGTTTTACAGGCAAAAAATGCATCTAATAGTGATGGGTTAGTTGCTTCTACTCGGGGTTCCAGTGACAGTGGTTTACTAGATATGCTTGAAGGAAAGCTTGCTGTTCTTCGGTTTCAGATAAAAATCAAAGAGGAATTAGAGGCTATGGCTTCCAGTTCTGAGGTTTTACATAGCACACCCGGCTCTGTTGAAAACGGTTTAGGCCCTGAGACCAGTTCAGCTGTTGATGCCGATTTTGCAAATGCAACAAGAGAGAAAGCCAAAGAGCTATCATCAGATTTGAAGAGCATAACACAGTTATATAATGAATATGCTGTTCCCTTTAAGCTTTGGGAGACATGCCTGGAGATGCTATACTTTGCCAATTATTCTGGTGATAGTGACAGCAGCATTGTCAGAGAGACATGGGCTAGACTTATAGATCAAGCAATTTCAAGAGGTGGCATTGCTGAAGCTTGCTCGGTATTAAAGAGAGTTGGGCCCCGCCTTTATCCGGGTGATGGAACTGTTTTACAGCTTGACATTATTTGTCTTCACCTGGAGAAGGCTGGACTGGAGAGATTAAATTCAGGAGTTGAATCAGTTGGAGATGAAGATGTTGCTAGAGCTCTTGTTTCTGCTTGTAAGGGTGCAGCAGAACCTGTATTGAACGCATATGACCAATTGTTATCAAATGGGGCGATTTTGCCATCCCCAAATCTTAGATTACGGATGCTGAGATCAGTTCTAGTGGTACTTCGTGAGTGGGCTATGTCTGTATATTCACAGAGAATGGGTACAGGTGCCACTGGGTCTTCCCTAATACTCGGTGGAGGAGGATTCTCATTGGAGCGTACAGTTGCTAGCCAAGGAATTCGGGACAAGATCACAAGTGTGGCAAACAGGTATATGACTGAAGTACGGAGGTTAGCCCTTCCACAGAGCCAAACAGAAGTGGTTTACAGAGGCTTTAAAGAACTTGAAGAGTCGCTTATAAGTCCTCATTCATTTGGTCGATTTTGA 4458 0.4455 MSWEDEIVIRDVTNAGLVVSDRIGREVSSQHDLEEALEASRYASHPYSTHPREWPPLVEVANTWELPPVLIERYNAAGGEGTAFCGIFPEIRRAWASVDNSLFLWRFDKWDGQCPEYSGEEQAICAVGLAKSKPGVFVEAIQYLLILATPVELIIVGVCCSGGADGSDPFAEVSLQPLPDYTIPSDGVTMTSVACTDKGRIFLAGRDGHIYELLYSTGSGWQKRCRKICVTAGLGSVISRWVIPNVFNFGAVDPVVEMVFDNERQILYARTEEMKLQVYVLGPIGDGPLKKVAEERNLINQKDAHHGGRQSNGSRVSSRSPKASIVCISPLSTLESKWLHLVAVLSDGRRMYLSTSPSSGSLTGFNTTHPKPSCLKVVTTRPAPPWGVSGGLTFGTMALAGRPQNDDLSLKVEAAYYSSGTLILSDASPPTMPSLLLLNRDSTTQSSASGNLGTGTRSSRALRESVSSLPVEGRMLAVADVLPLPDTSATVQSLYSEIEFGGYESSMESCERASGKLWARGDLSTQHILPRRRIVIFSTMGMMEIVFNRPLDILRRLLESNSPRSVLEDFFNRFGAGEAAAMCLMLAARIVHSENLISNVIAEKAAEAFEDPRLVGMPQLEGSNALSNTRTAAGGFSMGQVVQEAEPVFSGAHEGLCLCSSRLLFPLWELPVMVVKGSLGASGTSYENGVVVCRLSIGAMQVLELKLRSLEKFLRSRRNQRRGLYGCVAGLGDLSGSILYGTGSALGADDRSMVRNLFGAYSRNMESNGGGATNKRQRLPYSPAELAAMEVRAMECIRQLLLRSGEALFLLQLLSQHHVTRLIQGFDANLQQALVQLTFHQLVCSEEGDRLATRLISALMEYYTGPDGRGTVEDISKRLREGCPSYYKESDYKFFLAVEALERAAVTIDDEEKENLAREALNSLSKVPESADLRTVCKRFEDLRFYEAVVCLPLQKAQAIDPAGDAYNDEIDATVREQALARREQCYEIIISALRSLKGDTLRKEFGSPIRSASQSALDPASRKKYISQIVQLGVQSPDRIFHEYLYQAMIDLGLENELLEYGGPDLLPFLQSAGRKTIHEVRAVTATTSPMGQSGAPMSSNQVKYYELLARYYVLKRQHMLAAHALLRLAGRPSIDGVPTLEQRCQYLSNAVLQAKNASNSDGLVASTRGSSDSGLLDMLEGKLAVLRFQIKIKEELEAMASSSEVLHSTPGSVENGLGPETSSAVDADFANATREKAKELSSDLKSITQLYNEYAVPFKLWETCLEMLYFANYSGDSDSSIVRETWARLIDQAISRGGIAEACSVLKRVGPRLYPGDGTVLQLDIICLHLEKAGLERLNSGVESVGDEDVARALVSACKGAAEPVLNAYDQLLSNGAILPSPNLRLRMLRSVLVVLREWAMSVYSQRMGTGATGSSLILGGGGFSLERTVASQGIRDKITSVANRYMTEVRRLALPQSQTEVVYRGFKELEESLISPHSFGRF 1485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00231 1485 Gene3D Nucleoporin, helical domain, central subdomain 1056 1153 IPR042537 -
Car06g00231 1485 Gene3D - 1179 1419 IPR042538 -
Car06g00231 1485 MobiDBLite consensus disorder prediction 443 463 - -
Car06g00231 1485 Gene3D - 894 1053 IPR042533 -
Car06g00231 1485 Pfam Non-repetitive/WGA-negative nucleoporin C-terminal 872 1291 IPR007187 -
Car06g00231 1485 Gene3D - 531 883 - -
Car06g00231 1485 PANTHER BNAC05G49530D PROTEIN 2 1482 - -
Car06g00231 1485 Pfam Nup133 N terminal like 54 543 IPR014908 -
Car06g00231 1485 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP155 2 1482 IPR004870 GO:0005643|GO:0006913|GO:0017056
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00231 06 2445380 2455447 Car06g00231 06 2445380 2455447 ECH