Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00225 ATGGCTATGGCAAGAGATAAAAAAGAAGATGAAGAAGAGGTTGAAAATCAAAATCACAAGAAGAGGTTGAAATGCATGAGCAATAAGATGATGAATGAACAAGAAAAGAAAGTAATAGATGAAGAAGAAAGTGAGCTTCCATTGAAACCAGGACTTTTCTTCTACCCAACAACACCAACATCTTTTGTTGTAGCAGATGCACTTGAATCTGATTTTCCCATAATTTATGTCAACAAGGTTTTTGAAATCTCCACTGGTTATCGTGCTCATGAAGCTCTTGGTCGCAATTGTCGGTTCTTACAGTATAGGGATCCTCGAGCTCAAAGGAGGCACCCTTTGGTGGATCCTGTTGTTGTGTCTGAGATTAGAAGATGTCTTGAGGAAGGTATTGAGTTTCAAGGTGAACTTCTGAATTTCAGGAAGGATGGTACTCCTTTAGTGAACAGACTGAGGCTTGCACCAATACACGATGATGATGGAATTGTGACACATGTGATAGGTATTCAAATCTTTTCCGAGGCAAATGTAGATTTGAACCACGTCTCCTATCCAGTTTTCAGAGAGACTTGCATTCAAGGTTTTGATAAAAATGCTAAACGATGTACCAAGAGTGGAAAATCGTTGTACAGTCAGCAGCACAATGAGACGTGTGGCATTCTTCAGCTTTCTGATGAAGTCTTGGCGCACAACATTTTGTCACGATTGACACCGAGGGATGTTGCATCCATCGGTTCTGTTTGCAGGAGGATCCGTCAATTAACAAAGAATGAGCATGTTAGGAAGATGGTTTGTCAAAACGCGTGGGGCAAAGAAGTGACAGGTACATTGGAACTGATGACCAAGAAGTTAGGATGGGGTCGTCTGACTCGGGAACTCACTACTCTTGAAGCTGTTTGCTGGAAAAAAGTGACGGTCGGAGGTGGAGTGGAGCCTTCACGCTGCAACTTCAGTGCCTGTGCTGCAGGAAATAGGCTTGTATTATTTGGAGGTGAAGGAGTGGACATGCAGCCTATGGATGATACTTTTGTTCTAAATCTCGATGCTAAATATCCAGAATGGGAGAGGGTTAGTGTGAAATCATCTCCGCCCGGAAGGTGGGGCCACACGCTCTCGTGCTTAAACAATTCTTGGCTGGTGGTTTTCGGTGGATGTGGTAGGGAAGGATTGCTAAATGATGTGTTTGTGCTTGATTTGGATGCTCAACAGCCAACATGGAAagaagtcttcggtggagcaccgcctcttcctcgatcttggcacagttcttgcacaattgaaggctccaaattggttGTCTCAGGTGGTTGCACAGATGCCGGAGTACTTCTTAGTGACACGTATTTACTCGACCTCACAATCGATAACCCGACATGGAGAGAAATTCGATCTTCATGGACGCCTCCTTCTAGGTTAGGGCACTCACTCTCAGTCTATGAGAGGACAAAGATTCTCATGTTTGGTGGACTTGCTAAGAGTGGACACTTAAGGTTAAGATCAGGTGAGGCGTATACAATTGATCTAGAAGCCGAAAAACCACAATGGAGGCAACTAGAATGTAGTGAGTTCACTGGATTAGCAAGTCAAAATGCTGTTGTACCTCCTCCTAGATTGGATCATGTCGCTGTCAGCATGCCTTGTGGGAGGATTATTATATTTGGAGGTTCCATTGCAGGTCTTCACTCGCCGTCTCAGCTATTTCTGTTCGACCCTTCCGAAGAGAAACCGTCATGGAGGATCCTCAATGTTCCGGGGCAACCGCCTAAATTTGCTTGGGGTCATAGCACTTGTGTGGTTGGAGGGACTAGGGTTTTGGTGTTGGGTGGACATACTGGGGAGGAGTGGGTTCTCAATGAGGTGCACGAGTTATGCTTGGCGACCCGACAAGACTCGGACATGTGA 1899 0.4302 MAMARDKKEDEEEVENQNHKKRLKCMSNKMMNEQEKKVIDEEESELPLKPGLFFYPTTPTSFVVADALESDFPIIYVNKVFEISTGYRAHEALGRNCRFLQYRDPRAQRRHPLVDPVVVSEIRRCLEEGIEFQGELLNFRKDGTPLVNRLRLAPIHDDDGIVTHVIGIQIFSEANVDLNHVSYPVFRETCIQGFDKNAKRCTKSGKSLYSQQHNETCGILQLSDEVLAHNILSRLTPRDVASIGSVCRRIRQLTKNEHVRKMVCQNAWGKEVTGTLELMTKKLGWGRLTRELTTLEAVCWKKVTVGGGVEPSRCNFSACAAGNRLVLFGGEGVDMQPMDDTFVLNLDAKYPEWERVSVKSSPPGRWGHTLSCLNNSWLVVFGGCGREGLLNDVFVLDLDAQQPTWKEVFGGAPPLPRSWHSSCTIEGSKLVVSGGCTDAGVLLSDTYLLDLTIDNPTWREIRSSWTPPSRLGHSLSVYERTKILMFGGLAKSGHLRLRSGEAYTIDLEAEKPQWRQLECSEFTGLASQNAVVPPPRLDHVAVSMPCGRIIIFGGSIAGLHSPSQLFLFDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGGTRVLVLGGHTGEEWVLNEVHELCLATRQDSDM 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00225 632 PANTHER ADAGIO PROTEIN 3 15 630 - -
Car06g00225 632 SUPERFAMILY Kelch motif 530 626 IPR015915 GO:0005515
Car06g00225 632 TIGRFAM sensory_box: PAS domain S-box protein 70 168 IPR000014 -
Car06g00225 632 Pfam F-box domain 219 256 IPR001810 GO:0005515
Car06g00225 632 SUPERFAMILY PYP-like sensor domain (PAS domain) 62 169 IPR035965 -
Car06g00225 632 SUPERFAMILY Kelch motif 300 506 IPR015915 GO:0005515
Car06g00225 632 Pfam Galactose oxidase, central domain 427 478 - -
Car06g00225 632 Pfam Galactose oxidase, central domain 378 425 - -
Car06g00225 632 Gene3D - 292 494 IPR015915 GO:0005515
Car06g00225 632 Pfam Kelch motif 537 584 IPR011498 GO:0005515
Car06g00225 632 Gene3D - 495 628 IPR015915 GO:0005515
Car06g00225 632 SUPERFAMILY F-box domain 214 271 IPR036047 GO:0005515
Car06g00225 632 CDD PAS 58 168 IPR000014 -
Car06g00225 632 PANTHER BACTERIOOPSIN TRANSCRIPTIONAL ACTIVATOR 15 630 - -
Car06g00225 632 Pfam PAS domain 68 169 IPR000014 -
Car06g00225 632 Gene3D PAS domain 55 180 - -
Car06g00225 632 SMART pac_2 133 174 IPR001610 -
Car06g00225 632 MobiDBLite consensus disorder prediction 1 27 - -
Car06g00225 632 Coils Coil 9 36 - -
Car06g00225 632 Pfam Galactose oxidase, central domain 313 363 - -
Car06g00225 632 Gene3D - 212 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00225 Car-Chr6 2404033 2407206 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00225 57 170 AGC Kinase Gene Family AT5G58140 42.105 4.96e-20 92.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00225 06 2404033 2407206 Car06g00225 06 2404033 2407206 ECH