Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00223 ATGGGTGAAGGCATAGTTGAGAAAGCTCTAAACAGCTTAGGAAAAGGCTTCGATTTGACATCAGATTTCAGGCTCAAATTCTGTAAAGGTGAAAAAAGTTTGGTTCTTCTCAATGAATTTGATAAAAGAGAGATGATTGTGCCTGGTTTTGGAGCCATAAAAGATGTTTCTGTTGACATTAAATGTGATAAAGGAGATCGCACACACTATCAATCTGATATACTCACTTTCACCCAAATGTCAGAGCTATTCAATCAGAAAAGTTCAATCCTTGGAAAAATCCCAAGTGGATACTTCAATGCTATGTTTGGATTTGATGAAGGTTCATGGGCAGCTGAAGCAGCTAACACAAAGGGTTTGGGTCTTGATGGCTATTTGATAAAACTCTTTAATCTTCATATTCATCATTGCCCACTTCTTCTCTCTAAACAAGTCCTTCAAGATGTTCCTTCTTCATGGGATCCACCTTCACTTGCAAGATTCATTGAGAAGTTTGGGACTCACATCCTTGTGGGGCTTAGCATTGGAGGGAAAGATTTATTGCTGGTGAAGCAAGACGTGTCTTCCAACTTGGGGCCATCAGAGCTCAAGAATCACTTGGATGAACTTGGAGATCAGTTATTTAGTGGGACATGCAATTTCCTTCCCAAAAATAAAGACCACAAACACAAGGTACCGTCCGCTTTCAATGTCTTCAACGACTCAACATCCGTTTGTGCAAAAGATGGAATAACGGTGATATGTGCTAAAAGGGGAGGGGATACCCAAGTGAGTAGCCATAGTGAGTGGCTTCTGACAGTTCCTAGTAAAGCAGATGCAGTTGATTTTAGTTTCATTCCTATTACATCTCTTCTTAAAGGTCTTCCTGGTAGAGGTTTCCTTTCTCATGCTATCAACCTCTATCTTCGTTATAAGCCTCCTATGTCAGACTTGCCATATTTTCTTGACTACCAAGGACACAAACTTTGGGCTCCAGTTCACAATGATCTTCCTCTTGGCCCAGCTACAAACATAACTACTCTTTCACCTTTTCTTACCCTCAACTTGATGGGTCCCAAACTTTATGTCAACACCGATAAGGTAATAGTTGGCAAAAGGCCTATCACAGGGATGCGCTTGTTTCTCGAAGGCATGAAAAACAACAGATTAGCCATACACGTGCAACATCTATTGAACACTCCAATAATGCTTAGCAATAAAATTGAGGACACTACAATATGGTCAGAAGAAATCAACGATGATCGTTTCTTTGAACCAATAAATGGGAAGAAATTTTCGCATGTATGTACATCATCAGTGAAATACAATCCTAAATGGAGTTCAAATAAAGATGTGTCATTTATTGTAACTGGAGCACAACTTCATGTCAAGAAACATGACACAAAGAGTGTCCTTCATCTAAGGTTATTGTTCTCCAAGGTGTCTAATTCTTTTGTTGTGAAATCAAATTGGACACAAGGCTCTTCTAGGTTATCACAAAAGTCTAGCATTTTTTCAGCAATAAGCACGTCAATTTCTAGTAAAGATAAAGACCAGCAAAAAGCAACAATAGTTTTGGATTCAAGTGTGTTTCCAACTGGGCCTCCAGTACCTGTACAAACACAAAAGATGTTGAAATTTGTGGACACATCCCAGTTATGTAAAGGCCCACAAGACAGTCCTGGACATTGGTTGGTCACTGGGGCAAAATTGGTCATGGACAAAGGTAAGATATGTTTGTGGGCCAAGTTCTCTTTGTTAAATATTGCCTTATGA 1755 0.3943 MGEGIVEKALNSLGKGFDLTSDFRLKFCKGEKSLVLLNEFDKREMIVPGFGAIKDVSVDIKCDKGDRTHYQSDILTFTQMSELFNQKSSILGKIPSGYFNAMFGFDEGSWAAEAANTKGLGLDGYLIKLFNLHIHHCPLLLSKQVLQDVPSSWDPPSLARFIEKFGTHILVGLSIGGKDLLLVKQDVSSNLGPSELKNHLDELGDQLFSGTCNFLPKNKDHKHKVPSAFNVFNDSTSVCAKDGITVICAKRGGDTQVSSHSEWLLTVPSKADAVDFSFIPITSLLKGLPGRGFLSHAINLYLRYKPPMSDLPYFLDYQGHKLWAPVHNDLPLGPATNITTLSPFLTLNLMGPKLYVNTDKVIVGKRPITGMRLFLEGMKNNRLAIHVQHLLNTPIMLSNKIEDTTIWSEEINDDRFFEPINGKKFSHVCTSSVKYNPKWSSNKDVSFIVTGAQLHVKKHDTKSVLHLRLLFSKVSNSFVVKSNWTQGSSRLSQKSSIFSAISTSISSKDKDQQKATIVLDSSVFPTGPPVPVQTQKMLKFVDTSQLCKGPQDSPGHWLVTGAKLVMDKGKICLWAKFSLLNIAL 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00223 584 ProSiteProfiles Membrane attack complex/perforin (MACPF) domain profile. 1 315 IPR020864 -
Car06g00223 584 PANTHER MACPF DOMAIN-CONTAINING PROTEIN CAD1 4 582 IPR044663 GO:0006952|GO:0012501|GO:2000031
Car06g00223 584 Pfam MAC/Perforin domain 99 301 IPR020864 -
Car06g00223 584 PANTHER OS02G0736300 PROTEIN 4 582 - -
Car06g00223 584 SMART MACPF_8 112 303 IPR020864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00223 Car-Chr6 2385970 2391389 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00223 06 2385970 2391389 Car06g00223 06 2385970 2391389 ECH