Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00221 ATGGTGTCAAGATCTTATTCAAATCTACTTGAGCTGGCTTCTGGTGAATCTCCATCTTTTGAACACATGAACAGAAGAATTCCTAGgattatgactgttgctggattgatatctgatgttgatgatgatgaCCCTTTGGAGAGTATTTGTTCTGACCCTTCTTCTTCATCTGTCCAAAGAGAAAGGATCATAATAGTTGCAAATCAGCTTCCTATAAAGGCTCATAGGAAACAAGATGGTAACAAGAATTGGTTTTTCAGTTGGGATGAGAATTCACTTTTACTTCAACTGAAAGATGGGTTAGGtgatgatgatgttgaggttatttatgttgGTTGTCTCAAAGAAGATGTTCATCCAAATGAACAAGATGAGGTTTCACAGATACTTCTTGAGACTTTCAAATGTGTACCAACTTTTCTACCACCTGAACTTTTTACAAGGTATTATCATGGTTTTTGTAAGCAACAGTTATGGCCACTGTTCCATTACATGTTGCCTTTGTCACCAGATTTAGGTGGAAGGTTCAATAGGTCACTTTGGCAGGCTTATGTATCAGTCAATAAGATCTTTGCTGACAGGATTATGGAAGTGATTAACCCTGAAGATGATTATGTTTGGATACATGATTATCATCTCATGGTGTTACCAACTTTCTTGAGAAAAAGGTTTAATAGAGTGAAACTTGGTTTCTTTCTCCATAGTCCTTTCCCTTCATCAGAAATTTACAAGACACTGCCTATTAGAGAAGAGCTTTTAAGAGCCCTTTTGAATTCTGATTTGATTGGTTTCCACACTTTTGATTATGCAAGACATTTTCTTTCTTGTTGTAGTAGGATGCTTGGTCTTACCTATGAATCCAAAAGGGGTTATATTGGAATTGAATATTATGGTAGGACAGTTAGTATCAAAATTCTACCTGTTGGCATACACATGGGTCAGCTTCAATCAGTTCTAAGTTTATCAAAGACTGAAGAGAAAGTTTCTGAGCTCATTACACAGTTTGTTGATAAAGGAAAGATAATGTTACTTGGTGTGGATGACATGGATATCTTTAAAGGGATAAGTTTGAAGCTATTGGCCATGGAGCAGCTTCTTATTCAGCACCCTGAGTGGCATGGAAAAGTTGTATTGGTTCAGATAGCAAATCCTGCTAGAGGAAGAGGGAAAGATGTGAAGGAAGTGCAAGCCGAGACGAAGGCGACAGCTAAGCGGATTAACGAATCATTTGGAAAGCCGGGTTATGATCCTGTTGTTTTGATTGAGGAGCCATTAAGGTTTTACGAGAAAGTTGCTTATTATGTTGTTGCTGAGTGTTGTTTAGTGACTGCAGTTAGAGATGGAATGAATCTCATACCTTATGAATATATAATAAGTCGTCAAGGGACCGAAAAATTGGACAAAGTTTTGGGAATAAGTTCATCCTCTAAGAAAAGCATGTTGGTTGTGTCTGAGTTTATTGGTTGTTCACCATCTTTAAGTGGAGCTATTAGAGTGAATCCATGGAACATTGATGCAGTAGCAGATGCAATGGATTTGGCTTTGGAAATGGCTGATTCAGAGAAACAGCTTAGACATGAGAAGCATTACAGATATGTTAGTACTCATGATGTGGGTTACTGGGCTCGTAGCTTCTTGCAAGATTTGGAAAGGACTTGTAGTGATCATGTAAGGAGAAGGTGGTGGGGAATTGGTTTTGGATTGAGTTTTAGAGTTGTAGCACTTGATCCAAACTTCAGAAAGCTCTCAATGGAGCACATAGTTTCGGCTTACAAGCGGACAAAAACTAGGGCGATACTACTAGATTATGATGGTACACTAATGCCTCAGGCTTCCATTGATAAAAGTCCAACCAGTAATTTCATTAAAATGCTTAATAGTTTGTGTAGAGATGAGAAGAACATGGTGTTTCTAGTCAGTGCGAAAAGCCGAAAGACgctttctgaatggttttctccttgtgaaaatcttggaattgccgccgaacatggttactttttaagACTGAAGCGCGACGCAGAATGGGAAACATGTGTACCTGTAACGGACTCCAGTtggaaacaaattgcagagcctgtgatgaaactttatactgaaacaactgatggatccacaattgaagataaggagacggcgcttgtttggtgctatgaggatgctgatccagattttgggtcatgccaagctaaagaacttcttaatcatcttgaaagtgtgcttacaaatgaaccagtaacagtgaagagtggcctgaataatgtggaggttaaaccacagggtgtgaacaaggggcttgtggctaaacgcctactttcaaccatgcaaggaaagggaatgtcacctgattttgttttgtgtataggcgatgaccgatctgatgaagacatgtttgaggtaatcaccagttcaatggctggtccttcaatggcacccagggctgaagtatttgcatgcactgttggtcgaaagccaagtaaggccaagtactatctcgatgatactaccgatatagtgagaatggtgcagggtttagcctatgtttcAGACCAATTAGTTTTATTTTAG 2565 0.2912 MVSRSYSNLLELASGESPSFEHMNRRIPRIMTVAGLISDVDDDDPLESICSDPSSSSVQRERIIIVANQLPIKAHRKQDGNKNWFFSWDENSLLLQLKDGLGDDDVEVIYVGCLKEDVHPNEQDEVSQILLETFKCVPTFLPPELFTRYYHGFCKQQLWPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDYVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLTYESKRGYIGIEYYGRTVSIKILPVGIHMGQLQSVLSLSKTEEKVSELITQFVDKGKIMLLGVDDMDIFKGISLKLLAMEQLLIQHPEWHGKVVLVQIANPARGRGKDVKEVQAETKATAKRINESFGKPGYDPVVLIEEPLRFYEKVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGTEKLDKVLGISSSSKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDLALEMADSEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCSDHVRRRWWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTKTRAILLDYDGTLMPQASIDKSPTSNFIKMLNSLCRDEKNMVFLVSAKSRKTLSEWFSPCENLGIAAEHGYFLRLKRDAEWETCVPVTDSSWKQIAEPVMKLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLNHLESVLTNEPVTVKSGLNNVEVKPQGVNKGLVAKRLLSTMQGKGMSPDFVLCIGDDRSDEDMFEVITSSMAGPSMAPRAEVFACTVGRKPSKAKYYLDDTTDIVRMVQGLAYVSDQLVLF 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00221 854 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6 1 850 - -
Car06g00221 854 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 850 IPR001830 GO:0003824|GO:0005992
Car06g00221 854 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 62 553 - -
Car06g00221 854 CDD GT20_TPS 62 550 IPR001830 GO:0003824|GO:0005992
Car06g00221 854 Gene3D - 596 729 IPR023214 -
Car06g00221 854 Gene3D - 730 852 IPR023214 -
Car06g00221 854 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 599 800 IPR006379 -
Car06g00221 854 TIGRFAM T6PP: trehalose-phosphatase 595 844 IPR003337 GO:0003824|GO:0005992
Car06g00221 854 Pfam Glycosyltransferase family 20 62 550 IPR001830 GO:0003824|GO:0005992
Car06g00221 854 SUPERFAMILY HAD-like 597 845 IPR036412 -
Car06g00221 854 Pfam Trehalose-phosphatase 600 834 IPR003337 GO:0003824|GO:0005992
Car06g00221 854 Gene3D Glycogen Phosphorylase B; 318 534 - -
Car06g00221 854 Gene3D Glycogen Phosphorylase B; 54 317 - -
Car06g00221 854 CDD HAD_TPP 598 839 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00221 Car-Chr6 2373157 2377334 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00221 1 852 Trehalose Biosynthesis Gene Families AT1G68020 80.600 0.0 1458
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00221 06 2373157 2377334 Car06g00221 06 2373157 2377334 ECH