Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00214 ATGTCGGCTCCAGTAGACCATTCAGATAAAGGGGTTGGAGCTATTCCCCAATCTCCAGTTACCCCAAATTGGACAATTCAAGTTTCAGATATAAAAACAGTTAAGGTAAGCAATGTATCAGTGGCTACTACAGAGAAGGATATCAAAGAATTCTTCTCATTCTCTGGTGACATTCAATTTGTTGAGATTCAAAGGGAAACTGAGAGTACTAAGACTGCATATGTTACCTTTAAGAGTACACAGGGAGCAGACACAGCAGTGCTATTGACGGGTTCCAACATAGCTAATTCTTCTGTCACCATCACACCTGTTGAGAACTACCATCTGCCTCCTGAAGCTATTCCGTCTAGTCCACAAACTCCTGCTGCTGTTAAGAAGGCTGAAGAAGTGGTGAGCACCATGCTTGCAAAAGGTTTTGTTTTGGGAAAGGATGCACTAAAGAGAGCCAAATCCTTTGACGAACGTCATCACTTGTTGTCAAATGCTTCTGCAACCGTTGCTTCCATCGATCGCAAAATCGGTTTGAGCGATAAACTAAGTATTGGAACAGCTATAGTAAATGAAAAAGTGAGAGAGATGGATGAAAAGTTTCAGGTTTCTGAGAAAACAAAGTCTGCTATTGCTGTTGCCGAGCAAAAGGCGAGTGATGCTGGAACTGCAATCATGAGCAATCCTTATGTATCAACTGGAGCTTCGTGGGTCTCGAGCGCCATTACGGCTGTTGCAAAGGCGGCTGAAGATGTAAGCACAATGACTAAGGAGAAGGTTGAATTGGCTGAGGTGGATAAGAAAGAGATCATTTATAGTGAAAAGAAAAGTGCAGCTGATGAATTGTCACATATACACTCTGAGAAACCTTCAGCAGCTGAGAGTTCTCCAAAAGGGCCTGTTATATCAGGTGAAGATAGTAAGTTGGCGATTATATGA 927 0.4239 MSAPVDHSDKGVGAIPQSPVTPNWTIQVSDIKTVKVSNVSVATTEKDIKEFFSFSGDIQFVEIQRETESTKTAYVTFKSTQGADTAVLLTGSNIANSSVTITPVENYHLPPEAIPSSPQTPAAVKKAEEVVSTMLAKGFVLGKDALKRAKSFDERHHLLSNASATVASIDRKIGLSDKLSIGTAIVNEKVREMDEKFQVSEKTKSAIAVAEQKASDAGTAIMSNPYVSTGASWVSSAITAVAKAAEDVSTMTKEKVELAEVDKKEIIYSEKKSAADELSHIHSEKPSAAESSPKGPVISGEDSKLAII 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00214 308 SUPERFAMILY RNA-binding domain, RBD 24 106 IPR035979 GO:0003676
Car06g00214 308 Gene3D - 28 102 IPR012677 -
Car06g00214 308 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 32 106 IPR000504 GO:0003723
Car06g00214 308 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 14 304 - -
Car06g00214 308 MobiDBLite consensus disorder prediction 274 308 - -
Car06g00214 308 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 35 97 IPR000504 GO:0003723
Car06g00214 308 PANTHER RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN 14 304 - -
Car06g00214 308 SMART rrm1_1 33 102 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00214 Car-Chr6 2305216 2308783 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00214 06 2305216 2308783 Car06g00214 06 2305216 2308783 ECH