Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00213 ATGGTGGGTCAGAATCTTTCACCAAAGGAAAAGAATAGAGATTGGATTAGAGCTCTTATGAATAGTAGCTCTGGTTACTGTGATGATCATCATGATCTTCGATCTAATGAGAAGAATAGTTTCTGTGTAGATTGTGCAGTTAGATTGTGTAGGCACTGTAAGGAAGCTCATTCCCTTCATAGAAACTTTCAGATATACCGATATTCCTATCAGGATGTTTTTCGACATTCCGAGTTGCAGAAGCATTTTGATTGCTCAAAGATTCAGACTTACATATCAAATAACGAAAGGATTGTGCATCTGAAACCCCGTCCTTCAATCTATAAATCTAAAGCTTCTGATCGAAGCCCTGAACCTAAATCCAAAGAAAGCAACTTATCAGCAAGACTTAAGTCTGGTGGTACTACATGCGAAAAATGTGGAAAACACATACAAGATGAGCGTAATCGTTTCTGCTCCATTACATGCAAGATCTCATTGCTTCCCATTGAGCCTCAAAGCCAAGGTCCAATTCATCACTCACAAAGGAGTTCAATTGATTCTATCAACAAAATTGGTAGATGCACCATCACTCAAAAACCTGAAACTATTGACTTTACTATGACTGATAACCATAATTCTTCGGAACCGGAGTCGTCTATCTCTGAAGCCGAGCCGTGTGGATGGGTTGAAGTTGTGAATTTCAGAAAGCGCCCAAGAAAAACCATCCCTCAGAGGCCTCTCTTTGTTTTCATTTCTTAG 741 0.3954 MVGQNLSPKEKNRDWIRALMNSSSGYCDDHHDLRSNEKNSFCVDCAVRLCRHCKEAHSLHRNFQIYRYSYQDVFRHSELQKHFDCSKIQTYISNNERIVHLKPRPSIYKSKASDRSPEPKSKESNLSARLKSGGTTCEKCGKHIQDERNRFCSITCKISLLPIEPQSQGPIHHSQRSSIDSINKIGRCTITQKPETIDFTMTDNHNSSEPESSISEAEPCGWVEVVNFRKRPRKTIPQRPLFVFIS 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00213 246 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 240 - -
Car06g00213 246 MobiDBLite consensus disorder prediction 103 128 - -
Car06g00213 246 MobiDBLite consensus disorder prediction 193 214 - -
Car06g00213 246 MobiDBLite consensus disorder prediction 107 125 - -
Car06g00213 246 MobiDBLite consensus disorder prediction 193 215 - -
Car06g00213 246 Pfam PLATZ transcription factor 67 158 IPR006734 -
Car06g00213 246 ProSiteProfiles Zinc finger B-box type profile. 22 65 IPR000315 GO:0008270
Car06g00213 246 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 1 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00213 Car-Chr6 2298246 2300438 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Car06g00213 PLATZ 5.6e-27 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00213 06 2298246 2300438 Car06g00213 06 2298246 2300438 ECH