Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00208 ATGTCTGTGCCACCGGTGCAGTGCGTATACGTAACGGAGGACTGTGTTCGCGAATGGAGGAGTGGCAATCCTTCATTCAAAGTCTCTCAATCCGTTCCAATGCTTCGTTTCCTCTACGAGCTATCTTGGACTATGGTTCGGGGTGAATTACCATTTCCGAAGTGTAAAGTAGCATTAGATTCTGTGATATTCTCAGATAAAGCTTCTGCTGAGAAAGTAGCATCAAATTTTGCAGATATAGTGAGCCAAATGGCTCAAGATCTTACATTGTCAGGAGAGTTTCGTTTGCGTCTCATTAAACTGGCAAAATGGCTTGTGGAATCTGGATTGGTTCCAGTTAGATTACTTCAAGAACGCTGTGAGGAAGAGTTTTTGGGGGAGGCTGAATTTATCAAAATTAAGGCGCAGGAGTTGAAGGGAAAAGAGGTCAGAGTTAATACAAGACTTCTTTATCAGCAAACCAAATTCAATCTTCTCAGAGAAGAGAGTGAGGGCTATGCCAAACTGATCACTCTTCTTTGTCGGGACTCCGAAGCAGCGACTCAGAAAGGATCTGCATCAACAATTGGGATCATTAAGTCATTAATTGGCCATTTTGATTTGGATCCAAACCGTGTTTTTGATATTGTACTTGAGTGTTTTGAATTTCAGCCCGATAATGATTTGTTTATAGAGCTGATTCCTATTTTTCCTAAGTCTCATGCTTCACAGATTCTTGGATTTAAATTTCAATATTATCAGCGCATGGAAGTCAGTAATCCTGTACCATTTGGGCTTTATAGACTTGCAGCCTTGCTGGTGAAGCAAGATTTTATCGATCTTGATAGCATATATGCTCATTTACTCCCCAAGGATGATGAAGCATTTGAGCAATATAGCACTTTCTCTTCCAAGCGCCTTGATGAGGCTAGTAAAATTGGAAAAATAAATCTTGCTGCTACTGGAAAAGATCTAATGGATGATGAGAAAATGGGGGATGTCACTATTGATCTCTTTGCAGCTTTAGCCACGGAAACTGATGCAATTGAAGAGCGGAAGTCTGAGCTTCAAAGCAGTCAAACTTTGGGCTTGTTTACTGGCTTTCTTTCTGTGGATGACTGGTATCATGCACATATACTATTTGAACGCCTCTCACCACTCAATCCCGTGGAACATATTCAAATATGTGATAGTTTGTTTAGGCTTATTGAGAAATCAATTTCTTCATCATATGATGTTATTCGTCAAGCACGTCTTCAAAACCCTGGATCATCCACTGGAGGCAGCAATGATGCTATGGACGTAGATAACCCTTCAGGACACAGTTCTTTCATAGATCTTCCGAAGGAACTTTTTCAGATGCTTGCTTGTACTGGACCTTATCTCTACCGAGATACTATGTTGTTGCAAAAGGTTTGTAGGGTGTTGAGAGGTTATTACCTTTCTGCTCTTGAGCTTGTTAGTCATGGCGATGGTGCCTCGAATCCTCAATTTCATGGAAATCCTCTTCTACATCAGAAGGAAGCAAAGCTAAGGTTGGAGGATGCTTTAGGAACATGTCTACTACCTTCTCTACAGTTGATTCCTGCTAATCCAGCTGTTGGCCAGGAAATTTGGGAACTTATGAGTCTTCTTCCTTATGAGGCACGATATCATTTATATGGTGAATGGGAAAAAGATGATGATCGCTATCCTATGCTGTTGGCTGCTAGACAAACTGCTAAGTTGGACACCAGACGTATTTTGAAGCGGCTGGCAAAGGAAAATTTGAAGCAGCTGGGTCGGATGGTTGCTAAATTAGCTCATGCCAACCCTATGACTGTCCTTCGAACAATTGTTCACCAGATTGAGGCATACAGAGACATGATTACTCCTGTAGTGGATGCATTTAAGTATTTGACTCAGCTTGAATATGATATATTGGAATATGTCGTGATTGAGCGTTTGGCACTTGGTGGACGTGATAAGTTGAAGGATGACGGGCTTAATTTATCAGACTGGCTTCAATCTCTAGCTTCATTTTGGGGCCATCTATGTAAAAAGTACCCATCAATGGAATTGCGGGGACTTTTCCAGTATCTAGTGAACCAGTTAAAAAGGGGACAAGGAATAGAGCTTGTTCTACTCCAGGAACTTATCCAACAAATGGCAAATGTTCAGTTCACAGAAAACTTGACTGAGGAACAGCTGGATGCTATGGCAGGGAGTGAAACTCTGAAATATCAAGCCACTTCTTTTGGAGTCACTCGAAATAATAAGGCATTGATAAAGTCAACTAGCAGGCTTAGAGATGCATTACTTCCTAAAGACGAACCGAAGTTGGCAACCCCCCTCTTGCTGCTTCTTGCTCAGCATCGTTCTCTGGTTCTCGTTAATGCAGATGCGCCCTACATTAAGATGGTCAGTGAACAGTTTGATAGATGCCATGGAACTCTTCTTCAGTATGTGGATTTTCTTGGCAGTGCAGTTACACCAGGATCAAATTATGCTATTCTTATTCCCTCACTCGATGACCTGGTCCACCTTTACCACTTGGACCCTGAGGTTGCTTTCTTGATATATCGCCCTATTATGAGACTTTTCAAGTCTCAGAGGATTCCCGATGTGTACTGGCCCTTGGATGATAAAAATGCTGCAAGTGATGCATCTACTAACTTTGAGTCTGACCCTGCAGATTATTCTGGTAGTATGATTCTAGATATTGGCCCCATCAAAAATCCGATTAGTTGGTCATATCTTCTTGATACTGTTAAAACCATGTTGCCTTCAAAAGCATGGAATAGCTTATCTCCTGATCTATATGCAACATTTTGGGGTCTCACATTATATGATCTGTACGTTCCAAAAAAACGTTACGAATCAGAAATAGCCAAGCTGCATGCTAGTCTTAAATCTTTGGAAGAACTTTCTGACAATTCAAGCTCAGCAATCACCAAGAGGAAGAAAGAAAAGGAAAGAATTCAAGAATCTCTTGATCGTCTGATTAGTGAACTGCATAAACATGAAGAAAATGTTGCATCTGTCAGTAGACGGCTCTCTCATGAAAAAGACAAATGGTTAAGTTCCTGCCCCGATACTTTGAAGATTAACATGGAGTTTCTTCAGCGTTGTATATTTCCACGCTGTACTTTCAGTATGCCAGATGCTGTTTATTGTGCTATGTTTGTACACAAACTTCATTCCCTTGGAACCCCTTTTTTTAACACAGTCAACCACATAGATGTTCTTATTTGTAAGACCCTTCAACCAATGATTTGCTGTTGCACTGAATACGAGGTTGGTAGGCTCGGCAGGTTTCTCTATCAGACTTTGAAGATTGCTTACTGTTGGAAGAGTGATGAATCTATTTATGAACGTGAGTGTGGAAACATGCCGGGATTTGCCGTTTATTATAGATATCCAAATAGCCAGCGAGTGACATATGGACAGTTCATTAAGGCAAGTTCATCAGTACATTGGAAATGGAGTCAAAGAATCACACGGTTACTAATTCAGTGTCTGGAATCTAGCGAGTACATGGAGATTAGAAATGCTCTGATAATGTTGACTAAAATTTCTGGTGTTTTCCCTGTTACTCGGAAGAGTGGGATAAACCTTGAAAAGCGGGTAGCGAAGATTAAAAGTGATGAAAGAGAGGATCTTAAGGTGTTGGCAACTGGTGTAGCAGCAGCACTTGCTGCTAGGAAGGTATGCTGTTATCTTATTACAAGCTTATTTGTACTATATTTTAGCACACTAATGTTATCCAATATGCAGTCTTCTTGGGTTACCGACGAAGAATTTGGTATGGGTTATCTTGATTTGAAGGCTGCACCTGGGATAAGTCTTAATGTTTCTCAAACTGAATCTACCAGTGGGAAACATCTAGAGTCTGGAAACACAGCCAAAGACCAGACAATAAGAACAAAAACCGCAGATGGCAAGTCAGAAAGAACTGAAAGCATCACAGCAACAAAATATGATTCTGGCCACGTAAAACTCAAGGGTGGCTCTATGGTGAATGGATTGGATGCTCAATCGTCTCTACCCTCACCTGCTGGACAATCCGGGGCATTAAAATCTGTGGAAAACCCAAAGCAAATGGAAGAATCCATAAGTAAGGCACCAGATGACCACACTACAAGAAACGTCGAGTCAAGAACCTCTACGAAACGCTCAGTTGCTGCTGGTTCACTTTCAAAGCCATCAAAACAAGATCCTGTGAAAGAGGATGGTAGATTTGGAAAAACTGTTATTAGAACCTCAGGTTCCTTGTGTAGCGACAAGGATCTTCAAACCCATGTATCAGATGGAAGACACACTGGAATTAACATCTCTACTTCAGTTAGTGCTAATGGTAACAGCGTTTCAGGTTCTGCAAAAGGTTTAGCTCCATTGGCTAAAATTTCATTTGATGGTTCTGGTAATGAATCAAAGGCAGAGGTTGGAGCTTCCAAGTCTTCTTTGGTGAAGGATGATGGAAGTGATATTGCTGACTTCACAAGAGGATCCTCTTCTCGTGTAGTGCATTCCCCTAGGCATGAAAACACTGCTACCTCAAAGTCTAGTGATAAAATTCAGAAGCGAGCTGGTTCTGCTGATGAACTAGACAGACTAGGTAAACGGAGGAAAGGTGATGTAGATCTAAGAGATTTAGAGGGTGAAGTTCGATTCTCTGAAAGAGAGAAGCTGTTGGATCCTCGAGTGGATGATGACAAAGGGGGACCAGATGAACTTGGTCTGTACAGAGCAGGTGATAAGACGTTGGAAAGGCCAAAGGAAAAAGGTAATGAAAGATATGAAAGGGAACATAGGGAAAGGTTGGACCGTCTGGACAAGTCTCGTGGTGATGACTTTGTTGTAGAAAAACCTAGGGATAGGTCAATAGAAAGATATGGGAGAGAACGATCTGTTGAGAGAATGCAAGAGAGGGGTAGCGAGAGGAGTTTCAATAGACTCCCTGACAAGGCAAAAGATGAAAGAAGTAAGGATGAAAGAAATAAATTACGATATAATGATGCATCAATAGAAAAATCTCATGCAGAGGAGCGTTTCCATGGGCAAAACTTGCCCCCGCCACCCCCTTTACCTCCTAATATGGTTCCTCAATCTGTTGGTGCTGGTAGGCGTGATGAAGATGCTGATAGGAGGTATGGAGCTACAAGGCATTCTCAAAGACTTTCTCCAAGGCATGAAGAAAAAGAACGGAGACGGTCTGAAGAGAGTGTGATTTTGCAGGATGATCCCAAACGTAGAAAAGATGATGATTTTCGAGATCGTAAGCGTGATGAAATGAAGAAAGCAAACATTCTAAAGGAAGAGTTGGATTTAAATGCTGCATCCAAGAGACGTAAACTTAAGAGGGAGCATCTACCAACTATGGAGCCTGGGGAGTACTCACCAGCTGCGCCTCCACCTCCTGCCTCAGGTATTGGTATGTCACATGCATATGATGGAAGAGACAGAAAAGGGCCAATGATCCAGCATCCTAGTTACATAGATGAACCAAGTCTTAGGATTCACGGTAAAGAGGTAGCCAGCAAGTTGAATCGTCGTGAATCAGATCCTTTGTATGACCGTGAATGGGACGACGAGAAGAGACAAAGAGCTGATCAAAAGCGAAGACATCGGAAGTGA 5595 0.4175 MSVPPVQCVYVTEDCVREWRSGNPSFKVSQSVPMLRFLYELSWTMVRGELPFPKCKVALDSVIFSDKASAEKVASNFADIVSQMAQDLTLSGEFRLRLIKLAKWLVESGLVPVRLLQERCEEEFLGEAEFIKIKAQELKGKEVRVNTRLLYQQTKFNLLREESEGYAKLITLLCRDSEAATQKGSASTIGIIKSLIGHFDLDPNRVFDIVLECFEFQPDNDLFIELIPIFPKSHASQILGFKFQYYQRMEVSNPVPFGLYRLAALLVKQDFIDLDSIYAHLLPKDDEAFEQYSTFSSKRLDEASKIGKINLAATGKDLMDDEKMGDVTIDLFAALATETDAIEERKSELQSSQTLGLFTGFLSVDDWYHAHILFERLSPLNPVEHIQICDSLFRLIEKSISSSYDVIRQARLQNPGSSTGGSNDAMDVDNPSGHSSFIDLPKELFQMLACTGPYLYRDTMLLQKVCRVLRGYYLSALELVSHGDGASNPQFHGNPLLHQKEAKLRLEDALGTCLLPSLQLIPANPAVGQEIWELMSLLPYEARYHLYGEWEKDDDRYPMLLAARQTAKLDTRRILKRLAKENLKQLGRMVAKLAHANPMTVLRTIVHQIEAYRDMITPVVDAFKYLTQLEYDILEYVVIERLALGGRDKLKDDGLNLSDWLQSLASFWGHLCKKYPSMELRGLFQYLVNQLKRGQGIELVLLQELIQQMANVQFTENLTEEQLDAMAGSETLKYQATSFGVTRNNKALIKSTSRLRDALLPKDEPKLATPLLLLLAQHRSLVLVNADAPYIKMVSEQFDRCHGTLLQYVDFLGSAVTPGSNYAILIPSLDDLVHLYHLDPEVAFLIYRPIMRLFKSQRIPDVYWPLDDKNAASDASTNFESDPADYSGSMILDIGPIKNPISWSYLLDTVKTMLPSKAWNSLSPDLYATFWGLTLYDLYVPKKRYESEIAKLHASLKSLEELSDNSSSAITKRKKEKERIQESLDRLISELHKHEENVASVSRRLSHEKDKWLSSCPDTLKINMEFLQRCIFPRCTFSMPDAVYCAMFVHKLHSLGTPFFNTVNHIDVLICKTLQPMICCCTEYEVGRLGRFLYQTLKIAYCWKSDESIYERECGNMPGFAVYYRYPNSQRVTYGQFIKASSSVHWKWSQRITRLLIQCLESSEYMEIRNALIMLTKISGVFPVTRKSGINLEKRVAKIKSDEREDLKVLATGVAAALAARKVCCYLITSLFVLYFSTLMLSNMQSSWVTDEEFGMGYLDLKAAPGISLNVSQTESTSGKHLESGNTAKDQTIRTKTADGKSERTESITATKYDSGHVKLKGGSMVNGLDAQSSLPSPAGQSGALKSVENPKQMEESISKAPDDHTTRNVESRTSTKRSVAAGSLSKPSKQDPVKEDGRFGKTVIRTSGSLCSDKDLQTHVSDGRHTGINISTSVSANGNSVSGSAKGLAPLAKISFDGSGNESKAEVGASKSSLVKDDGSDIADFTRGSSSRVVHSPRHENTATSKSSDKIQKRAGSADELDRLGKRRKGDVDLRDLEGEVRFSEREKLLDPRVDDDKGGPDELGLYRAGDKTLERPKEKGNERYEREHRERLDRLDKSRGDDFVVEKPRDRSIERYGRERSVERMQERGSERSFNRLPDKAKDERSKDERNKLRYNDASIEKSHAEERFHGQNLPPPPPLPPNMVPQSVGAGRRDEDADRRYGATRHSQRLSPRHEEKERRRSEESVILQDDPKRRKDDDFRDRKRDEMKKANILKEELDLNAASKRRKLKREHLPTMEPGEYSPAAPPPPASGIGMSHAYDGRDRKGPMIQHPSYIDEPSLRIHGKEVASKLNRRESDPLYDREWDDEKRQRADQKRRHRK 1864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00208 1864 Coils Coil 942 962 - -
Car06g00208 1864 MobiDBLite consensus disorder prediction 1272 1400 - -
Car06g00208 1864 MobiDBLite consensus disorder prediction 1822 1856 - -
Car06g00208 1864 MobiDBLite consensus disorder prediction 1356 1372 - -
Car06g00208 1864 Pfam Transcription factor/nuclear export subunit protein 2 919 1217 IPR021418 -
Car06g00208 1864 PANTHER THO2 PROTEIN 11 1774 IPR040007 GO:0000347|GO:0006397|GO:0006406
Car06g00208 1864 MobiDBLite consensus disorder prediction 1546 1864 - -
Car06g00208 1864 MobiDBLite consensus disorder prediction 1485 1502 - -
Car06g00208 1864 Coils Coil 1744 1764 - -
Car06g00208 1864 MobiDBLite consensus disorder prediction 1503 1532 - -
Car06g00208 1864 Pfam THO complex subunit 2 N-terminus 439 588 IPR032302 -
Car06g00208 1864 Pfam THO complex subunit 2 N-terminus 38 416 IPR032302 -
Car06g00208 1864 MobiDBLite consensus disorder prediction 1327 1354 - -
Car06g00208 1864 MobiDBLite consensus disorder prediction 1272 1293 - -
Car06g00208 1864 Coils Coil 970 1004 - -
Car06g00208 1864 MobiDBLite consensus disorder prediction 1546 1671 - -
Car06g00208 1864 MobiDBLite consensus disorder prediction 1294 1310 - -
Car06g00208 1864 MobiDBLite consensus disorder prediction 1483 1532 - -
Car06g00208 1864 Pfam Transcription- and export-related complex subunit 590 665 IPR021726 -
Car06g00208 1864 MobiDBLite consensus disorder prediction 1694 1780 - -
Car06g00208 1864 PANTHER THO COMPLEX SUBUNIT 2 11 1774 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00208 06 2255195 2275258 Car06g00208 06 2255195 2275258 ECH