Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00044 ATGGTCAAAACAAAAACGATCCTCCTGTTATTCTTCTTCAACATTTTAATTCTCCATTCTCTATCCATCTCGACGGACACATTCCTCTACGGAGGGTGCACACAAGAAAGGTACaccgcaacctcaccctacgagttcaacctcaactcgctcctcacctcaCTAGTCAACTCAGCAACCTACTCATCCTACAACAACTTCACCATCATTGCCTCAAATCCAAACGACGTCGTTTACGGTCTCTACCAATGCCGCGGCGACCTCTCCATGCCGGACTGCGCCTCCTGCGTCAGTAAAGCCGTCTCACGCGCCGGTGACATATGTCCGGCGGCCTGCGGCGGAGCAGTTCAGTTAGAGGGATGTTACGTGAAATATGACAATGCTAAGTTTTTGGGCGTGGAGGACAAAACGGTAATATTGAAGAAATGTGGGCCCTCCATTGGATATGATCCGGGTACGAGAGATGCGGTGTTATCCGGGTTAGTGGGTTCGGGTGGGTATTTTAGGGTTGGTGGGTCGGGTCAGTTGAAGGGAATGGTGCAGTGTAGTGGGGATTTGAGTTTTGTGGAGTGTCAGGATTGTGTTTCGGATGCGATCCGACGGTTGAGGATTGATTGTCCTGCCGCGGATTACGGGGATATGTTTTTGGCGAAGTGTTACGCGAGGTACTCTACTGGGGGTGGTGGTGGGGCCCATGCTTACTACAAGCCCCATGGTAAATCGGACAATGATGGTCAGAAAACATTTGCCATAATTATTGGATTATTAGCAGGCGTGGCTATACTTATTATTTTCCTAGCATTCTTGAGAAGGATTTGTGAGGGacatgGTAAATAA 837 0.4552 MVKTKTILLLFFFNILILHSLSISTDTFLYGGCTQERYTATSPYEFNLNSLLTSLVNSATYSSYNNFTIIASNPNDVVYGLYQCRGDLSMPDCASCVSKAVSRAGDICPAACGGAVQLEGCYVKYDNAKFLGVEDKTVILKKCGPSIGYDPGTRDAVLSGLVGSGGYFRVGGSGQLKGMVQCSGDLSFVECQDCVSDAIRRLRIDCPAADYGDMFLAKCYARYSTGGGGGAHAYYKPHGKSDNDGQKTFAIIIGLLAGVAILIIFLAFLRRICEGHGK 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00044 278 Gene3D - 25 130 IPR038408 -
Car06g00044 278 Gene3D - 157 226 IPR038408 -
Car06g00044 278 PANTHER PLASMODESMATA-LOCATED PROTEIN 5 5 274 - -
Car06g00044 278 ProSiteProfiles Gnk2-homologous domain profile. 131 228 IPR002902 -
Car06g00044 278 Pfam Salt stress response/antifungal 173 225 IPR002902 -
Car06g00044 278 Pfam Salt stress response/antifungal 33 127 IPR002902 -
Car06g00044 278 ProSiteProfiles Gnk2-homologous domain profile. 26 130 IPR002902 -
Car06g00044 278 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 5 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00044 Car-Chr6 565335 567018 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00044 7 224 Pollen Coat Proteome AT4G20670 27.160 1.47e-18 81.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00044 06 565335 567018 Car06g00044 06 565335 567018 ECH