Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00043 ATGGTTGCTTTGGTTTCTCAAGAAAATGTTGTAGTATTGGTTTCTCGTACTGGTAGAGAATTGCAGCGTTATAAAAAAGGTCGTCGCCAAGTTGTGGGATGCATACCATATAGATTTAAGATTGGGGAGAAAAATACCTTGGATATTTCAGATGAATTGGAGGTTCTTGTTATAAGTTCTCAAAAAGGCAAAGGGATGCTATTTCCAAAGGGAGGTTGGGAAATAGATGAATCTCAAAAGGAAGCAGCTTTGAGGGAAACTATAGAGGAAGCTGGTGTAAGAGGCATTGTTGAGggtaaattggGTAAATGGAGCTTCAAAAGTAAAACACATGATACATTATATGATGGCTATATGTTCCCTCTACTTGTTCAAGAGCAATTGGAATTTTGGCCTGAGCAAAATTTGCGTCAAAGAAAATGGATGAATATAAAAGAGGCAAGAGATGTTTGTCAACACTGGTGGATGAAAGAGGCTTTGGATAGACTTGTAAATCGTCTCTATGGTCAAAAACAAGTTATATGTCCTCTAAATTGCATTGGAGATGCCAAATCTGACTTGTTAATAGTGTAA 573 0.3665 MVALVSQENVVVLVSRTGRELQRYKKGRRQVVGCIPYRFKIGEKNTLDISDELEVLVISSQKGKGMLFPKGGWEIDESQKEAALRETIEEAGVRGIVEGKLGKWSFKSKTHDTLYDGYMFPLLVQEQLEFWPEQNLRQRKWMNIKEARDVCQHWWMKEALDRLVNRLYGQKQVICPLNCIGDAKSDLLIV 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00043 190 Pfam NUDIX domain 53 161 IPR000086 -
Car06g00043 190 SUPERFAMILY Nudix 23 168 IPR015797 -
Car06g00043 190 CDD Nudix_Hydrolase_9 30 157 - -
Car06g00043 190 ProSitePatterns Nudix box signature. 71 92 IPR020084 GO:0016787
Car06g00043 190 ProSiteProfiles Nudix hydrolase domain profile. 27 164 IPR000086 -
Car06g00043 190 PANTHER NUDIX HYDROLASE-LIKE PROTEIN 6 179 - -
Car06g00043 190 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 13 166 - -
Car06g00043 190 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 6 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00043 Car-Chr6 552804 554895 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00043 06 552804 554895 Car06g00043 06 552804 554895 ECH