Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car06g00032 ATGAAACCAAAATTTGATCTTGAAGTAGAGGCCTCAGCAGAATATGAATCTGAAGCTAGTAGCCAGGTTGAAACCTCTCCAGAAGAGCCTCATAACCATTCAGAGCCAATCTCACTTGACTTAACACTCAATTTCAACAACAATGACTTAGTTGTTAAAGATTCAACAGGATTCTCGTTCTCAAGCACTAGTGGAAGTAGCAATGAACTTGCCTCTCAAACTACTACTACCATCCCAAGAGTTTTCTCTTGCAACTATTGTCACCGCAAATTCTATAGCTCTCAGGCGCTCGGTGGCCACCAAAATGCACACAAAAGAGAAAGAATATTAGCGAAGCGAGCTATGCGAATCGGGCTATTCAATGAGAGGTATGCAAGTTTAGCATCTCTCCCTCTCAATGGTTCTTTCAGGTCTTTAGGTATAAAGACACACTCTTCTCTACACCATGGTTTTTCGCCACCAACAATATTAAGGCCTAATCCTGAAATAAAAAGTAACGTAAGAATCAAGCAAGGATATATTGGTCATTCGATATTCGCGGAGGATGAAGAAGCGGAACTGTTGTGGCAAGGTAGTTTCCATCATGAGGGAGCTGGTAATACTCATCAGAGTTCAAATCTTTGTTATAATGAGGTGGATGTGAAACCATTGGTTGACATAGAGAATTCAGCACCTGAATTAACATTGAAACTTTGA 696 0.4052 MKPKFDLEVEASAEYESEASSQVETSPEEPHNHSEPISLDLTLNFNNNDLVVKDSTGFSFSSTSGSSNELASQTTTTIPRVFSCNYCHRKFYSSQALGGHQNAHKRERILAKRAMRIGLFNERYASLASLPLNGSFRSLGIKTHSSLHHGFSPPTILRPNPEIKSNVRIKQGYIGHSIFAEDEEAELLWQGSFHHEGAGNTHQSSNLCYNEVDVKPLVDIENSAPELTLKL 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car06g00032 231 ProSiteProfiles Zinc finger C2H2 type domain profile. 82 109 IPR013087 -
Car06g00032 231 Gene3D Classic Zinc Finger 59 126 - -
Car06g00032 231 PANTHER ZINC FINGER PROTEIN JAGGED 1 231 IPR045320 GO:0003700
Car06g00032 231 PANTHER ZINC FINGER PROTEIN 3-RELATED 1 231 - -
Car06g00032 231 SUPERFAMILY beta-beta-alpha zinc fingers 80 109 IPR036236 -
Car06g00032 231 MobiDBLite consensus disorder prediction 1 39 - -
Car06g00032 231 ProSitePatterns Zinc finger C2H2 type domain signature. 84 104 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car06g00032 Car-Chr6 406794 408899 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car06g00032 80 231 C2H2 Transcription Factor Family AT1G66140 48.901 5.88e-44 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Car06g00032 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00032 06 406794 408899 Car06g00032 06 406794 408899 ECH