Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02856 ATGTCATCACCAATCGCCACCCCTTCTCCGCCATACGACCGTCTCAAAGCCGTGAAACAGTTCGACGAAACAAAAGCAGGAGTAAAAGGCCTAATCGACTCCGGAATCAAAACCATCCCTCCTTTCTTCATTCACCCGCAAGAAACCCTAATCGATCTTCTCCCTCGATCCGGACCCGAACCGGAAATTCCTACGATTGATCTATCCGCTTTGGAAAACTCACGCGCCACCGTCGTTGAACAGATTCGTTTCGCTGCGAGTACGGTGGGATTCTTTCAGGTAATTAACCATGGTGTGCCGGTGGATTTGCTCCGACGTGTTATTGGTGCTGTGAAAGGGTTTCATGAATCGCCTGCGGAGAAGAGGGCGGAGGTGTACCGTAGGGAGATGGGGACGGGCGTGTCTTATATTTCCAATGTTGATCTCTTTAATTCTAAAGCTGCCAGCTGGCGTGACACAATTCAGATTAAGATGGGACCAGGCGCAGTGGATGAGAAAGAGATTCCGGAGGTGTGCAGGAAGGAGGTGATGGAGTGGGATAAAGAAGTGGTGCGTGTAGGAGAGATTTTGCTGGGTTTGTTGAGTGAAGGGTTGGGATTAGATGCAGGAAGGCTGCCGGAAATGGGTTTGTCCCAAGGAAGGGTGATGGTTGGCCACTATTACCCATTTTGCCCTCAACCTAATCTTACTGTTGGGCTCAATTCCCATGCAGATCCAGGGGCATTGACGGTATTGTTGCAGGATCATATTGGTGGATTACAGGTTAGGACCCAACAGGGTTGGATTCATGTCAAGCCTCTTGATGGAGCTTTGGTTATCAACATTGGTGATTTACTTCAGATAATTTCTAATGAGGAGTATAAGAGTGCTGATCATCGGGTATTAGCCAATCCTTCTAATGAGCCACGAGTCTCGGTTGCCGTTTTCCTCAACCCGGGTAACAGGGAGAAACTCTTTGGACCTTTACCAGAGCTAACATCTACAGAGAAACCAGCTCTTTATCGAGATTTCACACTCATCGAATTTCTGACAAGGTTCTTCAAGAAAGAGCTTGATGGTAAATCGTTGACAAATTACTTCAGAAAGTGA 1089 0.4757 MSSPIATPSPPYDRLKAVKQFDETKAGVKGLIDSGIKTIPPFFIHPQETLIDLLPRSGPEPEIPTIDLSALENSRATVVEQIRFAASTVGFFQVINHGVPVDLLRRVIGAVKGFHESPAEKRAEVYRREMGTGVSYISNVDLFNSKAASWRDTIQIKMGPGAVDEKEIPEVCRKEVMEWDKEVVRVGEILLGLLSEGLGLDAGRLPEMGLSQGRVMVGHYYPFCPQPNLTVGLNSHADPGALTVLLQDHIGGLQVRTQQGWIHVKPLDGALVINIGDLLQIISNEEYKSADHRVLANPSNEPRVSVAVFLNPGNREKLFGPLPELTSTEKPALYRDFTLIEFLTRFFKKELDGKSLTNYFRK 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02856 362 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 10 350 - -
Car04g02856 362 Pfam non-haem dioxygenase in morphine synthesis N-terminal 63 159 IPR026992 -
Car04g02856 362 Gene3D - 18 344 IPR027443 -
Car04g02856 362 SUPERFAMILY Clavaminate synthase-like 25 354 - -
Car04g02856 362 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 212 312 IPR005123 -
Car04g02856 362 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE OXIDASE HOMOLOG 4-LIKE 10 350 - -
Car04g02856 362 Pfam 2OG-Fe(II) oxygenase superfamily 215 312 IPR044861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02856 Car-Chr4 55377628 55380956 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02856 5 361 Glycosyltransferase AT5G59530 45.479 9.49e-104 308
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g02856 04 55377628 55380956 Car04g02856 04 55377628 55380956 ECH