Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02843 ATGGCCATCGAAACTCTTGTTTTAGGCGCTGGTCAAGAGGTTGGGAAAAGCTGCGTAGTGGTGAACATCAATGGAAAGAGAATCATTCACTTGGATCATGTTGGAGCGTTGGTTTACTTCACTGAAGTTTGCGGGTATCGTGGCCCGGTTTACATGACGTACCCAACAAAAGCTTTGTCTCCTTTGATGTTGGAAGACTATCGGAAAGTGATGGTTGATCGTCGGGGTGAGGAAGAACAATTCACTTCTGATCATATTGCCGAGTGCATGAAGAAAGTTATTGCTGTAGATCTGAGGCAGACTGTGCAAGTAGATGAAGACCTGCAGATACGTGCATATTATGCAGGACATGTTATTGGAGCTGCGATGTTCTATGTAAAAGTAGGAGACGCAGAAATGGTTTATACAGGAGACTACAATATGACACCAGATAGACACCTAGGAGCAGCTCAAATTGATCGACTGCGACTTGATCTTCTTATAACTGAGTCTACATATGCGACTACAATACGTGATTCAAAATATGCTCGAGAAAGGGAATTCCTCAAAGCCGTTCATAAATGTGTTTCTGGTGGAGGAAAGGTGCTTATTCCAACATTTGCTCTTGGAAGAGCTCAGGAACTATGCATTTTGTTGGATGACTACTGGGAGCGCATGAATTTGAAGGTTCCTATCTACTTCTCTGCAGGATTAACTATTCAAGCTAATATGTATTACAAGATGCTTATTGGTTGGACAAGCCAGAAGATTAAAGATACCTACTCCACGCATAATGCATTTGATTTTAAGAATGTTCACAAATTTGAGAGGTCTATGATAGATGCTACTGGTCCTTGTGTTCTCTTTGCTACTCCTGGGATGATAAGTGGTGGATTTTCACTTGAAGTTTTTAAGCACTGGGCACCGTCAGAAAATAATCTTGTCACTTTGCCTGGGTATTGTGTGGCTGGAACTGTAGGACATAAATTAACGTCGGGTAAGCCGACCAAAATTAATACAGATCCCGACACACAGATTGATGTGCGTTGCCAGATTCATCAGTTGGCTTTTAGTCCTCATACCGATTCTAAAGGGATAATGGATCTTGTAAAGTTTCTCTCCCCAAAGCATGTTATACTAGTGCATGGTGAGAAGCCTAAGATGGCTTCTCTAAAAGAAAGAATTCATTCTGAATTGGGGATTCAATGTTATAATCCTGCAAACAATGAAACCGTATGCATTCCTTCAACTCAATATGTAAATGCAGAAGCCTCTGGTACTTTCATCCGAAACTGCTTGAATCCAAACTTCCAGTTTCAGAAATGCAGTTCAGAAGACACGAGCAACTCTACTATGATAGACAAAAACTTAACGCCCAAACTTCAAGTTGAAGATGAAAGAGTAGCAGATGGAGTTTTGGTCATGGAGAAAAGCAAAAAGGCAAAGATAGTAAACCGAGACGAACTTTTGCTCATGTTGGACGAAAAGAAGCGCAAGGTTTAG 1482 0.4116 MAIETLVLGAGQEVGKSCVVVNINGKRIIHLDHVGALVYFTEVCGYRGPVYMTYPTKALSPLMLEDYRKVMVDRRGEEEQFTSDHIAECMKKVIAVDLRQTVQVDEDLQIRAYYAGHVIGAAMFYVKVGDAEMVYTGDYNMTPDRHLGAAQIDRLRLDLLITESTYATTIRDSKYAREREFLKAVHKCVSGGGKVLIPTFALGRAQELCILLDDYWERMNLKVPIYFSAGLTIQANMYYKMLIGWTSQKIKDTYSTHNAFDFKNVHKFERSMIDATGPCVLFATPGMISGGFSLEVFKHWAPSENNLVTLPGYCVAGTVGHKLTSGKPTKINTDPDTQIDVRCQIHQLAFSPHTDSKGIMDLVKFLSPKHVILVHGEKPKMASLKERIHSELGIQCYNPANNETVCIPSTQYVNAEASGTFIRNCLNPNFQFQKCSSEDTSNSTMIDKNLTPKLQVEDERVADGVLVMEKSKKAKIVNRDELLLMLDEKKRKV 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02843 493 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 339 399 IPR011108 -
Car04g02843 493 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR FAMILY MEMBER 29 492 - -
Car04g02843 493 PANTHER CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR FAMILY MEMBER 1 29 - -
Car04g02843 493 SMART Lactamase_B_5a 15 193 IPR001279 -
Car04g02843 493 SUPERFAMILY Metallo-hydrolase/oxidoreductase 3 407 IPR036866 -
Car04g02843 493 Pfam Beta-Casp domain 205 323 IPR022712 -
Car04g02843 493 Gene3D - 173 351 - -
Car04g02843 493 SMART Beta_Casp_2 205 323 IPR022712 -
Car04g02843 493 Gene3D - 30 388 IPR036866 -
Car04g02843 493 PANTHER INTEGRATOR COMPLEX SUBUNIT 11 1 29 - -
Car04g02843 493 Pfam Metallo-beta-lactamase superfamily domain 31 152 IPR001279 -
Car04g02843 493 PANTHER INTEGRATOR COMPLEX SUBUNIT 11 29 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02843 Car-Chr4 55214427 55230561 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g02843 04 55214427 55230561 Car04g02843 04 55214427 55230561 ECH