Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02829 ATGGTAATCAGATCGAGAAGTTCGAAGCGGAAGCTTCAGCAAGAAGCACCATCTCACATCGTTAGCAAGAAGCTTCGGTCGAAGATTCCTCGCCGGAGAAGAAACCAGATATCTCCGGTGCTTCTTGCTTCGGCGAAATTCAAAATATCTAAAGAGAATCCTCGTCTTTCAGTTGATTCGAGCTCCGGCTCTGATTTCGCCGGCGGTGAAGTTTCGTGCAATTCCAGCAGAATTTCTTCTGTATTTGTTGGCAAAGGAACGACGAGCTCGAGAAACGGTGAAATCGGAGAGTGTGTGAGTTTGATGATAAATCGGAGATTTGAGAAGCGGAGTGAAAACGAAGTTGAAGTATCGGAGAATTCGTGTGTGGATTCAAATTATAATGTTCGTGAACGAAATAGAAGCTTGATTTTGAAGTTCAAAAGTGGAAAAGAAAACGATGAAGCTTCTGAAGTTTGCACGAAATCGGAAATTACTTGTGCGGATAATTCAAAATCGAGTAACGGAAATTTGAATATCTCAGCGCGAAACGACGTCGTTTCAGTTAGTTCCGGTGCTCGGGAAACGTCGTTTGAAGAGGAAAAGAGAAGAATCACTGAAAACAGAGCATCGGAATCTGAATTCTCTTCGAGAAACCGTCACGATGATGAGAATTGCACGGATTTGATAGCGCAATCGATTATAAAGCAATGCTCGGATAATTCAGGCTCCGATTCCGATCTAGCTTGTAGAGAGCAATTGCATTTCTCGTCCTACGACGATGAATCAGAGTATTGTTCAAGTCAGGGGACTACGTCATTCTCTGATCTTCACTCCGAGATTTTCGGTGATTGCTCTGATTATAGTCCGTCTCTGTTCACCGATTCTGGAAGTCAGTTTTCGCAAGGATCCGTTGGAGAAACTCATTCGCCAATGTATTCGTTGTTCCTTCAATACCGTGAGGAATTCACGACGCTAGCTACTCGTGTTAATAATACTTCAAGCGTCGAAGAAGAGGTTTCTATAAATCATAATTTTTTAAGGTTAGAAGATTTGGATGACGAAGAGAGCTATCAGATGCTAAGGAAGAGGGAACGGAGGCAAGTTTTCATGTGGAATTATGCTGAAAGATATTTCTCTACAACGGAATTCGGCAAACTCGTGCTTCAGCAACGCTGCGAAATGGTTCACTGGATCATTGAGCAATCTTATCGAAAACAACTTCGACAAGAGACGGTGTTTCTTGGAATCAGCCTACTTGACCGTTTCCTGAGCAAGGGATACTTCAAAGAAGAAAGAAACCTTCAAATTGTTGGAATAGCGTGCCTTACATTGGCCACCAGGATCGAAGAAAACCAGCAATGTAACAGAGTGGGGCAAAAACATTTCTACGTGGAAAAAATTGTTTACAGTAGATGCGAAGTAGTGGCTATGGAATGGATTGTGCAGGAGGTGCTCGAGTTCCAGTGTTTTCATCCAACCATCTACAATTTCTTGTGGTTTTACCTAAAAGCTGTTAATGCTGATGCTGCTATGGAGAAAAGGGTGAGGTGCCTAGCATTACTGGCTCTGTCAGCTCGTGATCAGCTGTGTTACTGGCCCTCGACTGTTGCCGCTGCACTTGTTATCCTGGCTTCTCTAGAACTCAATCAGAATGCATCCCACAAAGTCATAGGGATCCACGTTAGATCAAAGGATGAGAATTTGCATGAATGCATGGAGAGCCTGGAATGGTTGTTACGCTATCTATGCTAA 1734 0.4319 MVIRSRSSKRKLQQEAPSHIVSKKLRSKIPRRRRNQISPVLLASAKFKISKENPRLSVDSSSGSDFAGGEVSCNSSRISSVFVGKGTTSSRNGEIGECVSLMINRRFEKRSENEVEVSENSCVDSNYNVRERNRSLILKFKSGKENDEASEVCTKSEITCADNSKSSNGNLNISARNDVVSVSSGARETSFEEEKRRITENRASESEFSSRNRHDDENCTDLIAQSIIKQCSDNSGSDSDLACREQLHFSSYDDESEYCSSQGTTSFSDLHSEIFGDCSDYSPSLFTDSGSQFSQGSVGETHSPMYSLFLQYREEFTTLATRVNNTSSVEEEVSINHNFLRLEDLDDEESYQMLRKRERRQVFMWNYAERYFSTTEFGKLVLQQRCEMVHWIIEQSYRKQLRQETVFLGISLLDRFLSKGYFKEERNLQIVGIACLTLATRIEENQQCNRVGQKHFYVEKIVYSRCEVVAMEWIVQEVLEFQCFHPTIYNFLWFYLKAVNADAAMEKRVRCLALLALSARDQLCYWPSTVAAALVILASLELNQNASHKVIGIHVRSKDENLHECMESLEWLLRYLC 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02829 577 Gene3D - 478 576 - -
Car04g02829 577 SMART cyclin_7 390 477 IPR013763 -
Car04g02829 577 PANTHER CYCLINS 9 567 IPR039361 -
Car04g02829 577 ProSitePatterns Cyclins signature. 385 416 IPR006671 -
Car04g02829 577 Gene3D - 366 477 - -
Car04g02829 577 MobiDBLite consensus disorder prediction 188 215 - -
Car04g02829 577 PANTHER CYCLIN-SDS 9 567 - -
Car04g02829 577 MobiDBLite consensus disorder prediction 182 215 - -
Car04g02829 577 SUPERFAMILY Cyclin-like 486 573 IPR036915 -
Car04g02829 577 CDD CYCLIN 385 444 IPR013763 -
Car04g02829 577 SUPERFAMILY Cyclin-like 343 482 IPR036915 -
Car04g02829 577 PIRSF Cyclin_A_B_D_E 347 574 IPR039361 -
Car04g02829 577 PIRSF Cyclin_A_B_D_E 44 231 IPR039361 -
Car04g02829 577 Pfam Cyclin, N-terminal domain 380 482 IPR006671 -
Car04g02829 577 Pfam Cyclin, C-terminal domain 486 570 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02829 Car-Chr4 54945052 54952137 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02829 385 545 Core Cell Cycle Gene Families AT5G25380 32.530 4.12e-17 82.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g02829 04 54945052 54952137 Car04g02829 04 54945052 54952137 ECH