Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car04g02826 ATGTCTCTCTCAAACCCCATTTTCCTCTTCTTGTTTTTTCTCTTCAACCTTCAACCTTCAATTTCCCAACAACAACAAAAAATAACATCTTTCAACATCTCAAACTCACCATGGCTTCCTTCACAAAACAAAACCTTAATTTCACCAAACACCAATTTCACTGCTGGTTTCTTCCCCATACCAAATTCCCAAAATCTCTTCACTTTCTCAATTTGGTTCTCAAAAATCCCCCAAACTTCAAACCCTGTTATTTGGAGCTTCTCAAAAAAACTCAATTTCTCTTCCTCACTTGTAATCACTTCAAAAGGTGAAATTTTACTCAACAATGTTACTCTTTTTGGTAATTCCAATTCCACAAAACTTGTTCTTCATGATAGTGGAAACTTAGTTTTTGGAAATTGGACTAGTTTTGCAAATCCAAAAAACACTATCTTACCATACCAAAACATTAGTGGAGTTGAAATTGTTTCAAATAATGAGAAATTCAAGTTCATTACATCACAGTTTTTGGTTCTCAATGATGGTTCAAATGCAAATTCAACTTCTCAATACTATAAGACACCAAACCCTTTGTTGTTTATGGATGATGCTGGAAAAATGAGTATGGTAGGTAACTCTTTTCTCACTTCTGATTTTGGTGATTCTAGGTTTAGAAAATTTGTTCTTGATGATGATGGTAATCTTAGAATCTATAGCTTTTATCCTGAACAAAATAACACTTGGGTTGTTGTTTGGTTAGCAATATGGGAAATGTGTAAAATCAAAGGAAATTGTGGTCCTAATGCTATTTGTATGCCTAGAGAAGATTTGTATAATTCTACTTTTTGTGTTTGTCCTTCTGGATTTATGCCTAATCAAGGTGGTGCTGAAAAGGGTTGTGAAAGGAAAATTCCACTTTCAAATGAGACTCATTTTGTTAGGCTTGATTATGTTAACTATACAACTAATGGTTCTATGAATCAAATTACTGCTGGAAACTATACAGTTTGTGAATCTAGTTGTAGATTTGATTCAAATTGTCTTGGATTCGGTTTCAAATACGACGGATTGGGATATTGTGTTTTGTTGCGAGGTAAACAGCTTCAATATGGTTATTGGTCGCCGGGGACTGAAACCGCTTTGTTTTTGAAAGTTGATCAAAAGGAATCAGAAGCTACTAATTTCATTGGTATGACAGAGGTGATGCAAACAACTTGTCCTGTGAGGATAAGTTTGCCGCTACCGCCTAAGGATTCGAACACTACCACGAGAAATATTGTGATTATATGCACCCTTTTTGCAGCTGAACTTATTGCTGGTGTGGCTTTCTTTTGGTCTTTCCTTAAGAGGTATATCAAGTATAGGGACATGGCTACTACTTTGGGTCTTGAGCTTTTACCTGCTGGTGGTCCGAAAAGGTTTACCTACTCAGAGATCAAAGTTGCCACTAATGATTTCGCGAACCTTATTGGGAGAGGTGGATTTGGAGATGTCTACAAAGGGGTGTTGCCGGATCACCGTGTTGTCGCGGTGAAGTGTTTAAAGAATGTCACCGGGGGTGATGCTGaattttgggctgaagtcaccattattgcaaggatgcatcacctcaatttggttcgtttgtggggtttctgtgccgagaaaggtcaaaggatacttgtttatgaatacattcctggtggatcattggacaagtatctctttagggctaaATCTCGTAAGAATAGTGCCGAATCTGAATCTGATCAGAGTCATAGTAGTCCGAAACCGAACTCACAAGAGAAGCCTgttttggattggaacatgagctttggcatggtgctattggagcttgtgagtggagtgaggaactTTGAGATTCAAGGTTCTTTGGTGAGGAGTGATGAATGGTATTTCCCTGGTTGGGCTTTTGATAAGATGTTTAAGGAGATGAGAGTTGAAGATATTCTTGATAGTCAAATTTGTCATGCTTATGATAGTAAAGTACATTTTCAATTGGTTAATAGAATGGTGAAGACTGCAATGTGGTGTTTACAAGATAGACCTGAGTCAAGGCCAACAATGGGGAAGGTTGCCAAGATGTTGGAAGGGACTGTGGAGATAATGGATCCTAAGAAGCCAACTGTTTTCTTCCTTGGGGAAGAGTAG 2130 0.3376 MSLSNPIFLFLFFLFNLQPSISQQQQKITSFNISNSPWLPSQNKTLISPNTNFTAGFFPIPNSQNLFTFSIWFSKIPQTSNPVIWSFSKKLNFSSSLVITSKGEILLNNVTLFGNSNSTKLVLHDSGNLVFGNWTSFANPKNTILPYQNISGVEIVSNNEKFKFITSQFLVLNDGSNANSTSQYYKTPNPLLFMDDAGKMSMVGNSFLTSDFGDSRFRKFVLDDDGNLRIYSFYPEQNNTWVVVWLAIWEMCKIKGNCGPNAICMPREDLYNSTFCVCPSGFMPNQGGAEKGCERKIPLSNETHFVRLDYVNYTTNGSMNQITAGNYTVCESSCRFDSNCLGFGFKYDGLGYCVLLRGKQLQYGYWSPGTETALFLKVDQKESEATNFIGMTEVMQTTCPVRISLPLPPKDSNTTTRNIVIICTLFAAELIAGVAFFWSFLKRYIKYRDMATTLGLELLPAGGPKRFTYSEIKVATNDFANLIGRGGFGDVYKGVLPDHRVVAVKCLKNVTGGDAEFWAEVTIIARMHHLNLVRLWGFCAEKGQRILVYEYIPGGSLDKYLFRAKSRKNSAESESDQSHSSPKPNSQEKPVLDWNMSFGMVLLELVSGVRNFEIQGSLVRSDEWYFPGWAFDKMFKEMRVEDILDSQICHAYDSKVHFQLVNRMVKTAMWCLQDRPESRPTMGKVAKMLEGTVEIMDPKKPTVFFLGEE 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car04g02826 709 PIRSF SRK 596 709 IPR024171 GO:0004674
Car04g02826 709 PIRSF SRK 1 572 IPR024171 GO:0004674
Car04g02826 709 ProSiteProfiles Protein kinase domain profile. 477 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car04g02826 709 Gene3D Transferase(Phosphotransferase) domain 1 596 700 - -
Car04g02826 709 SUPERFAMILY Protein kinase-like (PK-like) 597 690 IPR011009 -
Car04g02826 709 CDD EGF 252 283 - -
Car04g02826 709 ProSitePatterns Protein kinases ATP-binding region signature. 483 505 IPR017441 GO:0005524
Car04g02826 709 ProSiteProfiles PAN/Apple domain profile. 293 379 IPR003609 -
Car04g02826 709 PANTHER OS07G0415500 PROTEIN 7 596 - -
Car04g02826 709 MobiDBLite consensus disorder prediction 570 591 - -
Car04g02826 709 Pfam Protein tyrosine and serine/threonine kinase 480 569 IPR001245 GO:0004672|GO:0006468
Car04g02826 709 MobiDBLite consensus disorder prediction 575 591 - -
Car04g02826 709 PANTHER OS10G0101000 PROTEIN 7 596 - -
Car04g02826 709 PANTHER OS10G0101000 PROTEIN 597 709 - -
Car04g02826 709 SUPERFAMILY Protein kinase-like (PK-like) 459 565 IPR011009 -
Car04g02826 709 Pfam S-locus glycoprotein domain 213 285 IPR000858 GO:0048544
Car04g02826 709 Gene3D - 32 143 IPR036426 -
Car04g02826 709 Gene3D Phosphorylase Kinase; domain 1 451 551 - -
Car04g02826 709 SUPERFAMILY alpha-D-mannose-specific plant lectins 85 150 IPR036426 -
Car04g02826 709 PANTHER OS07G0415500 PROTEIN 597 709 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car04g02826 Car-Chr4 54916288 54918678 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car04g02826 404 569 Receptor kinase-like Gene Family AT3G59740 37.572 1.28e-26 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Car04g02826 PK_Tyr_Ser-Thr 1.3e-15 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car04g02826 04 54916288 54918678 Car04g02826 04 54916288 54918678 ECH