Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car02g01521 ATGCATCCTGTTTCTGAACAGAGTAGATTAATTTTGGGATCTTTGAATTCTTTGAGTTGCATGGTTTGGTTCTTGAATGATAAAAATCAAGTTTCAACTAGACAAAATGCTTCTTTGTTGATTAAAGAAATGCATGTTGAGTCATTGATGAAAATTGAAGGGATTGTTGAAACTTTAGTGAACATGGTTAAGGTTCCTATCGGGAGTGTTTCTACAAAAGCATGTTTGTCAACAATTTTTCACTTGGTTTTCTCATCCAAGAGTAAAAAAGTGGTTTTTGAGAGGTTTGTTGAATTGGGTTTAGTTTCAATTTTATTGGAGATTATTGTTGATGCTGAAAAAGGGGTATGTGAGAAATCTTTAGGGGTGTTGGATTGTCTTTGTGATAGTAAAAATGGGGTGGGAATAGCAAAGTCAAATGCTTTGACTTTGCTTTTAGTGATTAAGAAGCTTTTAAGAGTGTCTGAATTGAGTTCAAGTTTTGTTGTTTCTATTGTTTACAAGATTTGTTGTGATAATAAGGGGGAGGAAGAAGGTGTTTTGATTGAGGCAATTTAA 558 0.3333 MHPVSEQSRLILGSLNSLSCMVWFLNDKNQVSTRQNASLLIKEMHVESLMKIEGIVETLVNMVKVPIGSVSTKACLSTIFHLVFSSKSKKVVFERFVELGLVSILLEIIVDAEKGVCEKSLGVLDCLCDSKNGVGIAKSNALTLLLVIKKLLRVSELSSSFVVSIVYKICCDNKGEEEGVLIEAI 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car02g01521 185 Gene3D - 4 179 IPR011989 -
Car02g01521 185 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 1 185 - -
Car02g01521 185 SUPERFAMILY ARM repeat 9 147 IPR016024 -
Car02g01521 185 PANTHER WDSAM1 PROTEIN 1 185 IPR045185 GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car02g01521 Car-Chr2 42546779 42547336 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car02g01521 1 169 U-box Gene Family AT5G37490 36.000 1.48e-23 94.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00033 06 424124 425832 Car02g01521 02 42546779 42547336 PCT