Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g02458 ATGGCTACTCGAAACATTGAGAAGATGGCTTCAATTGATGCTCAGCTGAGATTATTGGCACCAAGAAAAGTTTCTGATGATGACAAACTTGTGGAGTATGATGCTTTGTTGTTGGATCGTTTCCTTGACATTCTTCAGGATTTGCATGGACAAGATATCAGACAAACTGTTCAAGATTGTTATGAGCTATCAGCAGAGTATGAAGGGAATCATGAGTCTGAGAAGTTGGAGGAACTTGGGAATATGTTGACTGGTCTTGATGCTGGAGATTCTATTGTCATATCCAAATCATTTTCTCACATGCTTAATTTGGCAAACTTGGCTGAGGAAGTTCAAATTGCATATAGGAGAAGGATCAAGTTATTGAAGAAGGGTGATTTTGCTGATGAAAATTCTGCTATAACTGAGTCAGATATTGAAGAAACTTTGAAGAGGCTTGTGACTGAACTGAAGAAGACTCCTGAAGAAGTCTTTGATGCTTTGAAAAATCAAACTGTAGATTTGGTCTTAACTGCTCATCCTACTCAGTCTATTAGGAGATCTTTGCTTCAAAAGCATGGAAGGATAAGGAATTGCTTAACACAGTTGTATGCTAAAGACATAACACCAGATGATAAGCAGGAACTTGATGAGGCTTTACAGAGAGAGACAATTTGGAAAGGAGTGCCGAAGTTTTTGCGTCGGGTTGATACAGCTCTAAAGAACATTGGAATAAATGAACGTATCCCATATAATGCTCCTGTTATCCAATTCTCTTCTTGGATGGGAGGAGATCGTGACGGTAATCCTAGGGTAACCCCTGAAGTTACAAGGGATGTGTGTTTGCTCGCTCGAATGATGGCTGCTAATTTGTACTTCTCTCAGATAGAGGATCTCATGTTTGAGCTGTCTATGTGGCGCTGCAACGACGATCTTCGTGTTAGAGCTCATGAGCTTCATAGATCCTCAAAGAGAGACGCAAAACATTATATTGAGTTTTGGAAACAGATTCCTCCAAATGAGCCATATCGTGTCATTCTTGGATTCGTGAGGGACAAACTGTATAATACACGCGAACGTGCTCGCCAGTTATTAGCTAATGGGACCTCTGACATCCCTGAAGAGACAACCTTCACAAATGTTGAGCAGTTTCTGGAGCCTCTTGAACTCTGTTATAGATCACTTTGTGCATGCGGTGACCGACCAATAGCAGATGGAAGCCTACTCGATTTCTTGCGTCAAGTTTCTACATTTGGACTTTCACTTGTAAGGCTCGATATTCGCCAAGAGTCGGACAGACACACTGATGTTATGGATGCAATTACAAAACACTTGGAGATTGGATCATACCGAGAATGGTCAGAGGAAAGCAGGCAGGAATGGCTCTTATCCGAGCTTAGTGGAAAGCGGCCTCTATTTGGCCACGACCTTCCTAAAACAGAAGAAATTGCTGATGTTTTAGAAACCTTCCGTGTCATTTCAGAACTTCCTTCGGACAACTTTGGCGCTTATATAATCTCGATGGCAACATCTCCATCTGATGTGCTTGCTGTCGAGCTTTTACAACGCGAATGTCATGTGAAGCAGCCTTTAAGAGTTGTTCCACTGTTTGAAAAGCTTGCTGATCTTGAGTCTGCTCCAGCTGCAGTAGCGCGGCTTTTCTCGATAGATTGGTACAGAAACCGCATTGATGGTAAGCAAGAAGTTATGATAGGATACTCAGACTCAGGAAAAGATGCGGGCCGTCTTTCAGCAGCTTGGGCACTATACAAGGCTCAAGAGGAACTCATAAATGTAGCAAAGGAGTTTGGTGTTAAGCTAACAATGTTCCACGGCCGAGGAGGGACAGTTGGAAGAGGAGGAGGTCCTACTCATCTTGCTATATTGTCTCAGCCACCGGATACTATTCATGGCTCACTTCGGGTAACTGTTCAAGGTGAAGTTATTGAACAGTCATTTGGAGAGGAGCACTTGTGCTTTAGAACACTTCAGCGTTTCACTGCTGCTACACTTGAGCATGGAATGCATCCTCCTGTGTCGCCTAAACCTGAATGGCGTGCCCTTTTGGATGAGATGGCTGTCATTGCAACCAAGGAATATCGCTCCATTGTTTTCCAAGAACCTCATTTTGTTGAATACTTTCGATGCGCGACTCCTGAGTTGGAATATGGACGAATGAACATTGGCAGCCGTCCATCGAAACGAAAGCCTAGTGGAGGCATCGAATCTCTTCGCGCTATTCCTTGGATTTTTGCTTGGACACAAACAAGGTTTCATTTACCTGTATGGCTTGGCTTTGGAGAAGCATTCAAGCATGCAATTGAGAAAGATCCAAAGAATCTCCAAATGCTTCAAGATATGTATAATCAATGGCCTTTCTTCAGGGTCACTCTTGACTTGGTTGAGATGGTTTTCGCCAAAGGAGACCCCGGGATTGCTGCCTTATATGACAAACTCTTAGTTTCAAAAGCACTGCGTCCATTTGGTGAGCGTTTACGGGCTAAATTTGAAGAAACCAAGAGCTTTCTTCTCAAGGTTGCCGGGCACAAGGATCTTCTCGAAGGAGATCCCTACTTAAAGCAAAGACTACGCCTTCGAGACTCTTATATCACAACCCTAAATGTATTGCAAGCTTACACATTGAAGCAAATTCGCGATCCAGACTATGTGAAGATGAGGCCTCATTTGTCAAAGGATTATATGGAATCAAGCAAGCCAGCAGCAGAACTTGTTAAACTTAATCCAAAAAAGTGTTTCATGTCCTTCCCAAAGGCTACCGAGTTCCGCCATCGGGCGCTTCAAGGCGCCAAAATGACCTTCAAAGATCTAGCATTGAAGATGACAGATCAGTTAGAGATCATGATCATACAAGACATGATATTGATTGCAAAGGTGACACAATTCCTCATCATGGCTCATCCAAGTGCCATAACAAATTTCTATAGTTGTTGA 2931 0.4289 MATRNIEKMASIDAQLRLLAPRKVSDDDKLVEYDALLLDRFLDILQDLHGQDIRQTVQDCYELSAEYEGNHESEKLEELGNMLTGLDAGDSIVISKSFSHMLNLANLAEEVQIAYRRRIKLLKKGDFADENSAITESDIEETLKRLVTELKKTPEEVFDALKNQTVDLVLTAHPTQSIRRSLLQKHGRIRNCLTQLYAKDITPDDKQELDEALQRETIWKGVPKFLRRVDTALKNIGINERIPYNAPVIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYFSQIEDLMFELSMWRCNDDLRVRAHELHRSSKRDAKHYIEFWKQIPPNEPYRVILGFVRDKLYNTRERARQLLANGTSDIPEETTFTNVEQFLEPLELCYRSLCACGDRPIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVMDAITKHLEIGSYREWSEESRQEWLLSELSGKRPLFGHDLPKTEEIADVLETFRVISELPSDNFGAYIISMATSPSDVLAVELLQRECHVKQPLRVVPLFEKLADLESAPAAVARLFSIDWYRNRIDGKQEVMIGYSDSGKDAGRLSAAWALYKAQEELINVAKEFGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIHGSLRVTVQGEVIEQSFGEEHLCFRTLQRFTAATLEHGMHPPVSPKPEWRALLDEMAVIATKEYRSIVFQEPHFVEYFRCATPELEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGEAFKHAIEKDPKNLQMLQDMYNQWPFFRVTLDLVEMVFAKGDPGIAALYDKLLVSKALRPFGERLRAKFEETKSFLLKVAGHKDLLEGDPYLKQRLRLRDSYITTLNVLQAYTLKQIRDPDYVKMRPHLSKDYMESSKPAAELVKLNPKKCFMSFPKATEFRHRALQGAKMTFKDLALKMTDQLEIMIIQDMILIAKVTQFLIMAHPSAITNFYSC 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g02458 976 Hamap Phosphoenolpyruvate carboxylase [ppc]. 23 944 IPR022805 GO:0006099|GO:0008964|GO:0015977
Car01g02458 976 ProSitePatterns Phosphoenolpyruvate carboxylase active site 1. 169 180 IPR018129 -
Car01g02458 976 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 216 911 IPR021135 GO:0006099|GO:0008964|GO:0015977
Car01g02458 976 PRINTS Phosphoenolpyruvate carboxylase signature 411 431 IPR021135 GO:0006099|GO:0008964|GO:0015977
Car01g02458 976 PRINTS Phosphoenolpyruvate carboxylase signature 602 631 IPR021135 GO:0006099|GO:0008964|GO:0015977
Car01g02458 976 PRINTS Phosphoenolpyruvate carboxylase signature 168 181 IPR021135 GO:0006099|GO:0008964|GO:0015977
Car01g02458 976 PRINTS Phosphoenolpyruvate carboxylase signature 560 580 IPR021135 GO:0006099|GO:0008964|GO:0015977
Car01g02458 976 PRINTS Phosphoenolpyruvate carboxylase signature 734 760 IPR021135 GO:0006099|GO:0008964|GO:0015977
Car01g02458 976 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 33 883 IPR015813 GO:0003824
Car01g02458 976 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 216 911 - -
Car01g02458 976 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 1 216 IPR021135 GO:0006099|GO:0008964|GO:0015977
Car01g02458 976 ProSitePatterns Phosphoenolpyruvate carboxylase active site 2. 562 574 IPR033129 -
Car01g02458 976 Pfam Phosphoenolpyruvate carboxylase 215 881 IPR021135 GO:0006099|GO:0008964|GO:0015977
Car01g02458 976 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE 1 216 - -
Car01g02458 976 Gene3D Phosphoenolpyruvate/pyruvate domain 279 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g02458 Car-Chr1 50251953 50258389 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g02458 01 50251953 50258389 Car01g02458 01 50251953 50258389 ECH
Car07g02232 07 32567495 32572952 Car01g02458 01 50251953 50258389 PCT