Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g01978 ATGTCCAACAAAGGAAAAGACATAGTAGAAGGATCATCAAGATCTTCCACTTCAACAATAGGTGATGCCACCGGCGGTGGCGATcatcaacgacaacaacagcagcaacaacaacaacaGATACCACTTAGCCGATACGAATCTCAAAAGAGAAGAGATTGGAACACTTTTGGACAATACTTAAGGAATCAAAGGCCACCAGTTGCACTCTCACAGTGTAACTCAAACCATGTTCTTGAGTTTCTAAGGTACTTAGACCAATTTGGAAAAACCAAAGTGCACTTACAAGGTTGTCTCTTTTTTGGTCAAGTTGAACCACCTGGTCCTTGTACTTGTCCTCTAAAACAAGCTTGGGGAAGCCTTGATGCACTTATTGGAAGATTAAGAGCTGCTTATGAAGAAAATGGAGGATTACCTGAGACTAATCCTTTTGCTAGTGGTTCCATTAGAATCTATCTTCGTGAAGTGAGAGACTCTCAAGCTAAAGCAAGAGGAATTCCTTACaagaagaaaaagaagaagagaaTTGCAATCAAACATAATGGGGATACCTCAAACTTACCTATGTAG 570 0.3667 MSNKGKDIVEGSSRSSTSTIGDATGGGDHQRQQQQQQQQQIPLSRYESQKRRDWNTFGQYLRNQRPPVALSQCNSNHVLEFLRYLDQFGKTKVHLQGCLFFGQVEPPGPCTCPLKQAWGSLDALIGRLRAAYEENGGLPETNPFASGSIRIYLREVRDSQAKARGIPYKKKKKKRIAIKHNGDTSNLPM 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g01978 189 ProSiteProfiles ALOG domain profile. 45 172 IPR006936 -
Car01g01978 189 PANTHER PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-LIKE 2 189 - -
Car01g01978 189 MobiDBLite consensus disorder prediction 1 49 - -
Car01g01978 189 PANTHER PROTEIN G1-LIKE2 2 189 IPR040222 -
Car01g01978 189 Pfam ALOG domain 37 158 IPR006936 -
Car01g01978 189 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g01978 Car-Chr1 44842607 44846193 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g01978 01 44842607 44846193 Car07g02235 07 32668473 32671760 ECH
Car06g01949 06 19494165 19498990 Car01g01978 01 44842607 44846193 ECH
Car01g01978 01 44842607 44846193 Car01g00411 01 3224406 3229912 ECH
Car01g01978 01 44842607 44846193 Car06g00988 06 9616514 9619815 ECH
Car01g01978 01 44842607 44846193 Car01g01978 01 44842607 44846193 ECH