Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car01g00411 ATGTCCACCACAATGCAAAACGACGCCGTTCAAGCCTCATCGTCGACGTCACGACCCAACGGCGCGGATCAACAACCAACCGCAACGGCTCCTTTGAGCCGTTACGAGTCACAAAAAAAACGTGACTGGAACACGTTTGGACAATACTTAAGAAACCAAACACCAGCAGTTTCATTGTCTCAGTGCAACTTCAACCACGTACTTGAATTCCTTCGTTACCTCGACCAATTTGGAAAAACTAAGGTTCATTTACACGGTTGCATCTTTTTTGGACAACCCGATCCACCAGCACCGTGCACGTGTCCTTTGAGACAAGCTTGGGGAAGTCTCGATGCACTCATCGGACGGCTTAGAGCAGCTTACGAAGAACACGGTGGATCGCCGGAGAATAATCCGTTTGGGAGCGGAGCTATTCGTGTTTACCTTCGTGAGGTTAAGGAGTGTCAGTCAAAGGCAAGAGGGATTCCTTACACAAAGAAAAAGAAGAAAAGGATCACTCAAATTAAGGGCACTCATGCTACTTCTAAGTCCTTCAACCAATTAGCTTCTTGA 552 0.471 MSTTMQNDAVQASSSTSRPNGADQQPTATAPLSRYESQKKRDWNTFGQYLRNQTPAVSLSQCNFNHVLEFLRYLDQFGKTKVHLHGCIFFGQPDPPAPCTCPLRQAWGSLDALIGRLRAAYEEHGGSPENNPFGSGAIRVYLREVKECQSKARGIPYTKKKKKRITQIKGTHATSKSFNQLAS 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car01g00411 183 MobiDBLite consensus disorder prediction 1 38 - -
Car01g00411 183 PANTHER PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 7 176 - -
Car01g00411 183 PANTHER PROTEIN G1-LIKE2 7 176 IPR040222 -
Car01g00411 183 Pfam ALOG domain 29 147 IPR006936 -
Car01g00411 183 ProSiteProfiles ALOG domain profile. 34 161 IPR006936 -
Car01g00411 183 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car01g00411 Car-Chr1 3224406 3229912 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car01g00411 01 3224406 3229912 Car01g00411 01 3224406 3229912 ECH
Car01g00411 01 3224406 3229912 Car06g00988 06 9616514 9619815 ECH
Car01g01978 01 44842607 44846193 Car01g00411 01 3224406 3229912 ECH
Car07g02235 07 32668473 32671760 Car01g00411 01 3224406 3229912 ECH
Car06g01949 06 19494165 19498990 Car01g00411 01 3224406 3229912 ECH