Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00586 ATGGAGAGAGATTTCTTGGGTTTGAGCTCAACGGAGCCAACTGTGGTGAAGGAGGAGATTACCAGTGATGTATGCAAAGACCCAGGATTCACCAAGGGCTCAATTGTGCAATGGCCTTTCTCCAACAAAGTCTCTGCTGTTCCACATGTGGTGTCTTTTAAGGCTTCTCAAGATgacaagacaaaaatgatGGTGTCTGACTCCCTAACATCTGCTGGGTTTATGGCTATCTCAAGTCCAGATGCATATGATGCTAGTCAGAAACGGTCTGCAAGTGAACTCCAGAAATCTTTCAATCACGATGGGCAAGGTGGCTTTCATTTTTCCCTGACTCCATATCCTGTACAACATGATGTGCATTCTGTGAATCGTCCTCGTGATGTGAAGATGTTTTCAGTTTCCAATCAAGCAATTTCATTGTCCATGGGGCATCCTCTCATGAATAATCATTTTGCAACTGTTGGTCAGAATATGGCTGGTAATCATGTGAAGCCACAGATACTTGGTGGATTACCCGTTGCCGCTCCTCATTCAGTTCTTCCCGCCATTGGTTCAGTTTTAAAAATGAGCGAAACAtgTGTGAAGCCAGCTGCACCTGCTCAACTTACCATCTTCTATGGCGGTACTGTCAGTGTCTTTGATGATATCACCCCGGAGAAGGCACAAGCTATCATGCTTTTGGCCGGGAACGGGGTTTCTGCAGTTTCTAACATGGCACAGCCGAAAGTTCAGGTACCCTACCTTAAGCTGACATCAGTTGAAGGTATGCCTGTGAATCAGCCCATTAATGCTCCACCCTGCTCTGGTCTTGCAAGCCCTCTATCTGTTTCTTCACATACTGGTGCACAGTCAGGGACTGGCTCGACGAGCACGGAGGAGTTTCTGGTTGCTAAAACAACTGGAGTTCCCACCACTCCAGTTAGCAAATCTGATCCTCCAAAAGTACTCAATGCATCCACCATGTTGCCATCAGCGGTCCCCCAAGCTCGCAAAGCATCCTTGGCTAGATTTTTGGAGAAGCGCAAGGAAAGGGTGATGAGTGCTGCACCATACAACTTGAACAAGACATCCGAGGAGTGTGGCACTGCAGAATACAATGGTGCAAATTACTCAGCAAGTACTCCGATCAGTGCCAATGCTCTATG 1145 0.4638 MERDFLGLSSTEPTVVKEEITSDVCKDPGFTKGSIVQWPFSNKVSAVPHVVSFKASQDDKTKMMVSDSLTSAGFMAISSPDAYDASQKRSASELQKSFNHDGQGGFHFSLTPYPVQHDVHSVNRPRDVKMFSVSNQAISLSMGHPLMNNHFATVGQNMAGNHVKPQILGGLPVAAPHSVLPAIGSVLKMSETCVKPAAPAQLTIFYGGTVSVFDDITPEKAQAIMLLAGNGVSAVSNMAQPKVQVPYLKLTSVEGMPVNQPINAPPCSGLASPLSVSSHTGAQSGTGSTSTEEFLVAKTTGVPTTPVSKSDPPKVLNASTMLPSAVPQARKASLARFLEKRKERVMSAAPYNLNKTSEECGTAEYNGANYSASTPISANAL 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00586 381 PANTHER PROTEIN TIFY 6B-LIKE ISOFORM X1 9 351 - -
Bva11g00586 381 SMART tify_2 195 230 IPR010399 -
Bva11g00586 381 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 9 351 IPR040390 -
Bva11g00586 381 Pfam Jas motif 327 351 IPR018467 -
Bva11g00586 381 Pfam tify domain 196 229 IPR010399 -
Bva11g00586 381 ProSiteProfiles Tify domain profile. 195 230 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00586 Bva-Chr11 9299328 9302838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00586 36 360 Tify Gene Family AT3G17860 37.681 1.76e-40 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Bva11g00586 tify 6.8e-19 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00586 11 9299328 9302838 Bva11g00586 11 9299328 9302838 ECH