Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00580 atgAGGATCTTTCATCTCTTGccctttcttattcttatgtTCTTGAGCTTCACCACCCCATCAACTTCCTCCACTGACTCCTTCATCTTCGGCGGTTGCTCTCAGGTGAAGTTCTTGCCGGGTTCCGATTACGAGAACCAAGTCAACTCCATCTTCACCTCCCTGGCCAATTCAGCCATGTTCACCAGCTACAATAATTTTACCTCCCAAGGTTCTTCCTCACAAGACACCGTGTACGGCCTCTTCCAGTGCCGTGGCGACCTCAACTCCGGCCAGTGCTCCCGTTGCGTGGCCCTTGCCGTGAGTCGGCTCGGCACCCTTTGCGTAAACTCCGCCGGCGGCGCGTTGCAGCTGGACGGTTGTTTTATTAAGTATGACAATTTAACGTTTTTGGGTGTGGAGGACAAGACTGTGGTGTTGAAGAAATGTGGACCGTCGACTGAGCTGACCTCTGATGCGTTGACTCGTCGAGATGCTGTGCTGGCGTATTTGGGGGCGTCTACTGGGTCTTACAAGGTGAGTAGCTCTGGGAATGTTTACGGTGTGGCGCAGTGTACCGGAGATTTGAGCATGAGCGAATGCCAGGATTGTGTCTCCGATGCGATCCAACGGCTGAAGACGGAGTGTGGGGGTGCTAACTGGGGAGATATGTACCTTGCCAAGTGCTACGCGCGTTACTCGGAGGGTGGAGATCACTCGCACGGTGGAAAGGATGATGATCACAACAAGAATGATGAAGAGATTCAGAAAACACTAGCCATTCTAGTTGGACTCATTGCTGGGGTTGCTCTAATCATaatcttcatttccttcttgaGCAAGGTGTGCAGAAAGCACAAAGAGGGTAAAtg 851 0.4971 MRIFHLLPFLILMFLSFTTPSTSSTDSFIFGGCSQVKFLPGSDYENQVNSIFTSLANSAMFTSYNNFTSQGSSSQDTVYGLFQCRGDLNSGQCSRCVALAVSRLGTLCVNSAGGALQLDGCFIKYDNLTFLGVEDKTVVLKKCGPSTELTSDALTRRDAVLAYLGASTGSYKVSSSGNVYGVAQCTGDLSMSECQDCVSDAIQRLKTECGGANWGDMYLAKCYARYSEGGDHSHGGKDDDHNKNDEEIQKTLAILVGLIAGVALIIIFISFLSKVCRKHKEGK 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00580 283 PANTHER PLASMODESMATA-LOCATED PROTEIN 6 6 280 - -
Bva11g00580 283 Pfam Salt stress response/antifungal 173 227 IPR002902 -
Bva11g00580 283 Pfam Salt stress response/antifungal 36 127 IPR002902 -
Bva11g00580 283 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 6 280 - -
Bva11g00580 283 Gene3D - 25 130 IPR038408 -
Bva11g00580 283 Gene3D - 147 229 IPR038408 -
Bva11g00580 283 ProSiteProfiles Gnk2-homologous domain profile. 131 231 IPR002902 -
Bva11g00580 283 ProSiteProfiles Gnk2-homologous domain profile. 26 130 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00580 Bva-Chr11 9268364 9271470 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00580 2 283 Receptor kinase-like Gene Family AT5G40380 25.256 7.09e-19 84.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00580 11 9268364 9271470 Bva11g00580 11 9268364 9271470 ECH