Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00576 ATGAACCTCTTCCTTTCAGTGGTCCTGGGGGGACCTTCCACTTCGAGAACAGTGGTTGGACTCATATACAGTCTTCGTTGGGACCCTTTCTCTCCCGTAAAGTTGGTGCCTTTTCTCTCTCCGGTGTTCAAAAGCCCTAGCCTTGTCTTCTGGGTTTGCAAAGTCAGCATCGGAATGAGTTCTGAAGAGTCCAGGGTAGTTGTTCCTAGGAATTTCAGATTATTGGAAGAGCTTGAGAGAGGCGAGAAGGGAATTGGTGATAGAACTGTCAGCTATGGAATGGATGATGCTGATGATATACTCATGCAGTCTTGGACAGGGACTATTATTGGTCCCCCTGGTACTGTCCACGAAGGGCGTATCTACCAGTTGAAATTGTTCTGCGACAAGGACTATCCGGACAATCCACCATCTGTTAGATTTCAAACAAGGATTAACATGACTTGTGTCAACCAAGAATCTGGCTTGGTTGAGCCACAACTATTTCCCTTGCTTGCTAATTGGCAACGGGAGTATACTATGGAAGACATATTGGtccaattgaagaaagaaatgatgtCTCCCCAAAATCGGAAGCTAGCTCAGCCTCCTGAAGGCAACGAAGAAGGCAGAATTGATCAAAAGGGGCTGGTGCTGAGATGTTGCATTGTGTA 653 0.4502 MNLFLSVVLGGPSTSRTVVGLIYSLRWDPFSPVKLVPFLSPVFKSPSLVFWVCKVSIGMSSEESRVVVPRNFRLLEELERGEKGIGDRTVSYGMDDADDILMQSWTGTIIGPPGTVHEGRIYQLKLFCDKDYPDNPPSVRFQTRINMTCVNQESGLVEPQLFPLLANWQREYTMEDILVQLKKEMMSPQNRKLAQPPEGNEEGRIDQKGLVLRCCIV 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00576 217 Pfam Ubiquitin-conjugating enzyme 99 194 IPR000608 -
Bva11g00576 217 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 69 217 IPR000608 -
Bva11g00576 217 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 66 202 - -
Bva11g00576 217 SUPERFAMILY UBC-like 67 200 IPR016135 -
Bva11g00576 217 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 VARIANT 1A-LIKE 66 202 - -
Bva11g00576 217 SMART ubc_7 72 216 - -
Bva11g00576 217 Gene3D Ubiquitin Conjugating Enzyme 54 202 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00576 Bva-Chr11 9235867 9240474 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00576 11 9235867 9240474 Bva11g00576 11 9235867 9240474 ECH