Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00553 ATGGATTCTTCCAAGTCTCTGCGCTTCATCACCCACCAATCATTCTTCAGCAGCGTTCGATCTGGGGACCTTGATGGGCTTAAAGACCTACTTGAGCAGCTGGTTGAGGACGAATCTTCAAATGGGTCATCGGTTTCTGATCTCATGTCACTGCAGAACGATGGTGGAGAGACTGCTCTTTACATCGCTGCAGATAATAATCTTCAGGATGTGTTTAGCTACTTGCTCAAGTTCTCTGATTTTGAAGTCTTAAAGATAAGGTCCAAGTCTGATATGAACGCGTTTCAAATAGCAGCCAAGCGTGGCCATCTGGGTATTGTGAAGGAGATGTTGAATAAATGGCCTGAGATTTGTCGGTTATGTGACTCCTCAAACACTAGCGCTCTATACACAGCTGCTTTTCAAGATCATTTGGATGTAGTGAATGCTATCTTGGATTCTGATGTCAGTTCAATGATGATAGTtaggaaaaatggaaaaactgCATTGCACAATGTTGCTAGGTATGGAATGGTTCGTATTGTGAAAGCACTTATTGATCGAGATCCAGGAATAGTTCCcatcaaagataaaaaaggTCAAACTGCACTGCATATGGCTGTTAAAGGGCAGTGTCCTATAGTGGTGGAGGACATATTACAAGCTGATCCTACTATACTGAATGAACGAGATAAGAAGGGTAATACAGCTCTACACATGGCCACAAGGAAAGGACGTTCAGAGATAGTGAGCCTTTTGCTAAGCTATGCAGCTATGGATATCAATGCCATCAATAAACAGCAGGAAACTGCAATGGATTTGGCAGATAAACTTCCTTATGGAGATTCGGCTTTGGAAATCCAGGAAGCCCTTCATGAATCTGGTGCCAAGCATGCCAGGCATGTTGGCAAAGTGGATGAGGCTATGGAGCTTAAAAGAACTGTCAGTGATATCAAGCATGAAGTTCAGTCCCAACTCATACAGAACGAAAAAACTCGCAGACGAATGTCTGGTATAGCTAAAGAGTTGAAGAAGCTTCATAGAGAAGCAGTTCAGAACACCATTAACTCAGTCACTCTTGTTGCTGTCCTTTTTGCCTCAATTGCATTCTTGGCCATATTCAATTTGCCTGGCCAATATTTTTCGGATAGATCGGAGCCAGGGAAGGAGATAGGGGAGGCTCGTATAGCCGATAAAGTTGGTTTCCAAGCTTTCTGCCTTCTGAATGCTACATCTCTTTTCATCTCTCTAGCTGTTGTTGTAGTTCAAATCACTTTGGTAGCCTGGGACACAAGAGCTCAAAAGCAGGTTGTTTCCGTGGTTAACAAGTTAATGTGGGCTGCATGTGCCTGCACTTGTGGGGCCTTCCTTGCAATAGCTTTTGTCGTtgttggaaataaaaatacatcaatGGCCATAACCATCACCCTCTTTGGAGCACCAGTTCTGGTTGGAACTCTAGCGTTCCTATGCTATTTTGTTTTCAGGCAACGTTTTGGGTTTTTTCGCAGTGATTCCCAGAGACGAATTAAGAGAGCAAGTGGAAGCAAATCTTTCTCATGGTCTTACTCTGCAAATATATCAGATGGGGATGACTATGGTTCTGATCTTGAGAAGATTGTTGCTCTGTA 1610 0.4193 MDSSKSLRFITHQSFFSSVRSGDLDGLKDLLEQLVEDESSNGSSVSDLMSLQNDGGETALYIAADNNLQDVFSYLLKFSDFEVLKIRSKSDMNAFQIAAKRGHLGIVKEMLNKWPEICRLCDSSNTSALYTAAFQDHLDVVNAILDSDVSSMMIVRKNGKTALHNVARYGMVRIVKALIDRDPGIVPIKDKKGQTALHMAVKGQCPIVVEDILQADPTILNERDKKGNTALHMATRKGRSEIVSLLLSYAAMDINAINKQQETAMDLADKLPYGDSALEIQEALHESGAKHARHVGKVDEAMELKRTVSDIKHEVQSQLIQNEKTRRRMSGIAKELKKLHREAVQNTINSVTLVAVLFASIAFLAIFNLPGQYFSDRSEPGKEIGEARIADKVGFQAFCLLNATSLFISLAVVVVQITLVAWDTRAQKQVVSVVNKLMWAACACTCGAFLAIAFVVVGNKNTSMAITITLFGAPVLVGTLAFLCYFVFRQRFGFFRSDSQRRIKRASGSKSFSWSYSANISDGDDYGSDLEKIVAL 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00553 536 SUPERFAMILY Ankyrin repeat 16 272 IPR036770 -
Bva11g00553 536 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 2 536 - -
Bva11g00553 536 SMART ANK_2a 192 221 IPR002110 GO:0005515
Bva11g00553 536 SMART ANK_2a 90 119 IPR002110 GO:0005515
Bva11g00553 536 SMART ANK_2a 226 256 IPR002110 GO:0005515
Bva11g00553 536 SMART ANK_2a 55 83 IPR002110 GO:0005515
Bva11g00553 536 SMART ANK_2a 124 154 IPR002110 GO:0005515
Bva11g00553 536 SMART ANK_2a 158 188 IPR002110 GO:0005515
Bva11g00553 536 ProSiteProfiles Ankyrin repeat region circular profile. 226 251 - -
Bva11g00553 536 Pfam Ankyrin repeats (3 copies) 192 256 IPR002110 GO:0005515
Bva11g00553 536 ProSiteProfiles Ankyrin repeat region circular profile. 158 181 - -
Bva11g00553 536 ProSiteProfiles Ankyrin repeat profile. 158 181 IPR002110 GO:0005515
Bva11g00553 536 Pfam Domain of unknown function 342 455 IPR026961 -
Bva11g00553 536 Gene3D - 10 310 IPR036770 -
Bva11g00553 536 Coils Coil 322 342 - -
Bva11g00553 536 ProSiteProfiles Ankyrin repeat profile. 226 251 IPR002110 GO:0005515
Bva11g00553 536 PANTHER ANKYRIN REPEAT PLANT-LIKE PROTEIN 2 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00553 Bva-Chr11 9033028 9036028 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00553 5 536 Miscellaneous Gene Families AT2G01680 70.446 0.0 756
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00553 11 9033028 9036028 Bva11g00553 11 9033028 9036028 ECH