Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00535 ATGGGGGAAAGGGAAGATTTTGTGTTGACCCAGATGAAGAAATCAGTTGAGAATCTTGGCTCTTCTGCAGAGaTGTATGGGGAAGCAACACTGCTGAGGTTCTTGATTGCACGGTCTATGGACCCAGAAAAAGCAGCTAAGATGTTTGTTCAGTGGCAGAAGTGGAGGGTTACTATGGTGCCTAGTGGATTTATTTCAGAATCTGAAGTTCCAGATGAATTGGAAGCAAAGAAGGTCTTTCTACAGGGTTTGTCCAAGAATAAATATCCTGTGGTGATTGTCAAAGCTTGCAAGCATTTTCCTCCAAAGGATCAGATTCAATTCAAGAAGTTTGTTGTTTATATGCTGGACAAGGCTATTTCAAGTGCATGCAAAGAAAGGGAGACAGGAAATGAAAAGATGATTGGAATTCTTGATCTGCAGCAAATTGCATATAAAAACATCGATGCGCGAGGTTTAATCACtggatttcaatttttacagTCTTACTACCCTGAACGTTTAGCCAAGTGCTATATTCTAAACATGCCATGGTTTTTTGTGAGTGTTTGGAAACTGGTTTCTCGCTTCTTAGAGAAGGCAACGCTAGAAAAGGTTCGAATCGTGAGCAACGACGACGAGAGAAGAGAATTTATTGAAGAGGTTGGTGAAGATGTTATCCCAGAAGAACATGGTGGACAAGCAAAACTTGTTCCAATCCAAGATGTTGTATTGACCCCATCCCAAAATGGAATAGATAATTG 743 0.3984 MGEREDFVLTQMKKSVENLGSSAEMYGEATLLRFLIARSMDPEKAAKMFVQWQKWRVTMVPSGFISESEVPDELEAKKVFLQGLSKNKYPVVIVKACKHFPPKDQIQFKKFVVYMLDKAISSACKERETGNEKMIGILDLQQIAYKNIDARGLITGFQFLQSYYPERLAKCYILNMPWFFVSVWKLVSRFLEKATLEKVRIVSNDDERREFIEEVGEDVIPEEHGGQAKLVPIQDVVLTPSQNGIDN 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00535 247 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 67 232 IPR001251 -
Bva11g00535 247 SMART sec14_4 73 229 IPR001251 -
Bva11g00535 247 PANTHER OS03G0850700 PROTEIN 1 239 - -
Bva11g00535 247 PANTHER SEC14 CYTOSOLIC FACTOR-LIKE 1 239 - -
Bva11g00535 247 Pfam CRAL/TRIO domain 76 226 IPR001251 -
Bva11g00535 247 Gene3D - 2 238 IPR036865 -
Bva11g00535 247 CDD SEC14 79 227 IPR001251 -
Bva11g00535 247 SMART CRAL_TRIO_N_2 27 52 IPR011074 -
Bva11g00535 247 SUPERFAMILY CRAL/TRIO domain 68 229 IPR036865 -
Bva11g00535 247 SUPERFAMILY CRAL/TRIO N-terminal domain 4 63 IPR036273 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00535 Bva-Chr11 8910716 8914211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00535 6 203 Acyl Lipid Metabolism Gene Families AT5G47730 27.488 3.70e-14 69.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00535 11 8910716 8914211 Bva11g00535 11 8910716 8914211 ECH