Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00531 ATGGTGAAACCAACCCAGAATGGGTCTAATTCTGTGCCGCCTTTCCTGAAGAAATGCTATGCGATGGTTGACGATGAGTCCACGGACTCGATCATATGTTGGAGCCGAAGCAATGACAGTTTTGTTATCTCGGACATAACTGAATTTTCTGTCAAATTGCTTCCAAAGTTTTTCAAGCACAGCAATTTCTCCAGCTTCATCAGGCAACTCAATATTTATGGATTCCGGAAAATCGATACAGATCGCTGGGAGTTTTACAATGAAGGATTTGTCAGAGGTCAGAAGCATTTGTTGAAGAATATAACTAGAAGGAAACACCCACAAGTTGCAGATCAGAAAACAACACCACAACAGCCAGATAACAGTATCCAAGAAGATGCAAATCATGGGCTCTGGAAAGAAGTTGAAAATCTCACAGCTGATAAAATTGCACTTACACAAGAGTTGGTTAAACTCGGGCAGCACCAAGAGTCTTCAAAGAACAGCCTACTGCTTCTGGGGGATCAACTCCAAGTAATGGAAAAAACTCAGCAACAGATGTTACCATTCTTGGTCATGGCCATGCAAAGTGGCATTTTGGTTAAACTGCTTCAATCTCAGGAACATAATTGGCGCATGGCTGAAGCTGGGAATATGTTGGATCAAGTTGCCTCAGATGGGATGATAATAAAGTATACATCATCTCCTTTCGTCGCAGAAGCTGATATCCCTGCCATGGATGATATTTCCATCAATTCTgactttttaaaagtattgaTGGATGAAAAACTGTGTCAAGCAGAACACCAGAGTCCATTTATTTTACCAGATTCGCCTGATGATGGCGGATGGGAACAGCTTCTTTTAGATAGTCCTTTCGCTGAAGATTCGATGCAGGAGAATGAGGAATCCTCAAACAGTGACATGGAGATGAAAGctacaaatgaaaaatctcCAGATTTTGAGTCTCTGATTGCAGAAATGGAGAAGACTCAAAAGTGGGGCTTGGAAGACCATGCCAATGGAGCATG 1010 0.4089 MVKPTQNGSNSVPPFLKKCYAMVDDESTDSIICWSRSNDSFVISDITEFSVKLLPKFFKHSNFSSFIRQLNIYGFRKIDTDRWEFYNEGFVRGQKHLLKNITRRKHPQVADQKTTPQQPDNSIQEDANHGLWKEVENLTADKIALTQELVKLGQHQESSKNSLLLLGDQLQVMEKTQQQMLPFLVMAMQSGILVKLLQSQEHNWRMAEAGNMLDQVASDGMIIKYTSSPFVAEADIPAMDDISINSDFLKVLMDEKLCQAEHQSPFILPDSPDDGGWEQLLLDSPFAEDSMQENEESSNSDMEMKATNEKSPDFESLIAEMEKTQKWGLEDHANGA 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00531 336 Gene3D - 7 105 IPR036388 -
Bva11g00531 336 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 1 312 IPR027725 -
Bva11g00531 336 PRINTS Heat shock factor (HSF) domain signature 66 78 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva11g00531 336 PRINTS Heat shock factor (HSF) domain signature 15 38 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva11g00531 336 PRINTS Heat shock factor (HSF) domain signature 53 65 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva11g00531 336 Pfam HSF-type DNA-binding 15 104 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva11g00531 336 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-8 1 312 - -
Bva11g00531 336 SMART hsfneu3 11 104 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva11g00531 336 ProSitePatterns HSF-type DNA-binding domain signature. 54 78 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva11g00531 336 SUPERFAMILY "Winged helix" DNA-binding domain 10 104 IPR036390 -
Bva11g00531 336 MobiDBLite consensus disorder prediction 288 314 - -
Bva11g00531 336 MobiDBLite consensus disorder prediction 103 124 - -
Bva11g00531 336 MobiDBLite consensus disorder prediction 298 314 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00531 Bva-Chr11 8861690 8864634 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00531 12 285 HSF AT1G67970 51.211 1.57e-86 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Bva11g00531 HSF_DNA-bind 7.9e-31 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00531 11 8861690 8864634 Bva11g00531 11 8861690 8864634 ECH