Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00524 ATGAAccgGCCGGTGGAGGAAGAAAATGTCAAGAATGAGGAAGAGGAATTCAACACTGGACCGCTATCTGTACTCATGATGAGTGTCAAGAACAATACTCAGGTGCTGATCAATTGTCGGAACAATCGAAAGCTTTTAGGTCGTGTTAGGGCTTTCGATAGGCACTGCAACATGGTTCTTGAAAATGTCAGGGAGATGTGGACCGAGGTTCCAAAAACTggtaaaggaaagaaaaaggcaaacCCAGTAAACAAAGACAGATTCATCAGCAAAATGTTTCTCCGTGGCGATTCTGTTATCATTGTTCTTAGGAATCCCAAATG 323 0.3932 MNRPVEEENVKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMVLENVREMWTEVPKTGKGKKKANPVNKDRFISKMFLRGDSVIIVLRNPK 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00524 107 SUPERFAMILY Sm-like ribonucleoproteins 20 105 IPR010920 -
Bva11g00524 107 SMART Sm3 25 104 IPR001163 -
Bva11g00524 107 Gene3D - 15 107 - -
Bva11g00524 107 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2 1 107 - -
Bva11g00524 107 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2 1 107 IPR027248 GO:0008380|GO:0030532
Bva11g00524 107 CDD Sm_D2 17 106 IPR027248 GO:0008380|GO:0030532
Bva11g00524 107 Pfam LSM domain 28 102 IPR001163 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00524 Bva-Chr11 8827277 8829659 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00524 11 8827277 8829659 Bva11g00524 11 8827277 8829659 ECH