Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00518 ATGTCTCTCCCAGCCATAGAGTGTATATATGTAACAGAAGACTGCCTTCGTGAATGGAAGAATGGCAACCCTGCCGGAAAGTTCTCCGAACCGGTTCCAATGCTTCGCTTCCTCTACGAGCTTTGCTGGACTATGGTTCGAGGTGAATTGCCGTTTCAGAAGTGTAAAGTAGCATTGGATTCTGTCATATTTTCTGATAAAGTTTCGAAAGAaaaactagcttcaaatttcgCAGATATAGTATCCCAAATGGCTCAAGATCTCACAATGTCAGCAGAGTTCCGCTCTCGTCTTATCAAACTGGCACGATGGCTTGTGGAATCTGAATTGGTCCCAATTAGGCTACTCCAAGAACGTTGTGAgGAAGAATTTTTAGGGGAGGCAGAactgataaaaataaaggctCAGGATTTGAAGGGGAAAGAGGTTAGAGTTAATACGCGACTTCTCTATCAGCAAACCAAATTTAACCTTCTCAGAGAAGAAAGTGAGGGCTATGCAAAGCTGATCACTCTTCTTTGCCGTGATCCTGAAGCTCCAACTCAAAAGGCATCTGCAGCAACAATTGGAATTATTAAGTCACTAATTGGCCATTTTGATTTGGATCCAAACCGTGTTTTTGATATTGTTCTCGAGTGTTGTGAACTTCAGCCCAATAGTGATGTCTTTTTAGAGCTTATCCCTATTTTTCCCAAGTCTCATGCTTCACAGATTCttggattcaaatttcaatattatcAGCGCATGGAAGTAAATAGCCCTGTACCATTTGGGCTCTATAAACTTACTGCATTGCTGGTGAAGCAAGAATTTATCAATCTTGATAGCATATACGCACATCTACTTCCCAAGGATGATGAAGCATTTGAACATTACAGCACCTTTTCTTCCAGGCGCCTTGATGAGGCTAACAAGATTGGAAAAATAAACCTTGCCGCTATTGGAAAGGATCTAATGGATGAAGAGAAACAGGGGGATGTCACTATAGATCTTTTTGCTGCTTTGGACATGGAAACTGAGGCAGTTGAAGAGCGAACATCTGAGcttcaaaataatcaaacttTGGGCTTGCTTACTGGCTTTCTTTCAGTGGATGACTGGTATCATGCACATATACTTTTTGATCGTCTCTCACCACTTAATCCAGTGGAGCATAACCAAATATGCAACAGCTTGTTTAGGCTTATTGAAAAGTCAATTTCTTCAGCAAATGTTGTTGCCCATCAAGCACATCTTCATAACCTTGCATCTTCATCAGGAGGCAGTAATGATGTAATGGATATAGATAACTCTTCACAACATAGTTCTTTCATAGATCTTCCAAAGGAGCTTTTTCAGATGCTTGCTTGTACTGGACCATATCTCTACCGTGATACTATATTGCTGCAGAAGGTTTGTAGGGTATTGAGAGGTTATTACCTTGCTGCTCTTCAGCTTGTGAATGGTGGTGAAGGTGCATTGAATCCTGAATCTCTTGTTAATGGAAATCCTCGCCTACATCTTAAGGAAGCAAGGTTAAGGATTGAGGATGCCTTGGGGACATGCCTGCTCCCTTCTTTGCAGTTGATTCCTGCCAATCCTGCTGTTGGGCAGGAGATTTGGGAACTAATGAGTCTCCTTCCGTATGAGGTGAGGTATCGTTTATATGGTGAATGGGAAAAGGATGATGATCGTACTCCTATGCTTTTGGCTGCAAGACAAACTGCTAAGTTGGACACCAGACGAATTTTGAAACGGCTAGCAAAGGAAAATTTGAAGCAGCTGGGTCGGATGGTTGCTAAATTAGCTCATGCAAATCCTATGACTGTACTTCGAACAATTGTTCTCCAgATTGAGGCATACAGAGATATGATTACTCCAGTTGTAGATGCATTCAAGTATCTGACTCAGCTTGAGTATGATATATTGGAATATGTGGTGATGGAGCGCTTGGCACTGGCTGGACGTGATAAGCTAAAGGATGACGGTCTTAATTTGTCAGACTGGCTTCAATCATTAGCCTCATTTTGGGGCCACCTGTGTAAGAAGTATCCATCGATGGAATTGCGGGGCCTTTTCCAGTATCTTGTGAATCAGTTGAAAAAGGGGCAAGGGATTGAGCTTGTGCTTCTTCAGGAGCTTATTCAACAAATGGCAAATGTCCAGTACACAGAGAACTTGACTGAGGAACAGCTAGATGCCATGGCAGGGAGTGAGACTCTCAGATATCAAGCAACATCTTTCGGAGTAACTCGAAATAATAAGGCACTGATCAAGTCAACTAACAGACTAAGAGATGCATTACTGCCAAAAGATGAACCAAAGTTGGCTATCCCACTGTTGTTGCTTATAGCTCAACACCGTTCTCTGGTTGTCATCAATGCAGATGCCCCGTACATTAAGATGGTTAGTGAGCAGTTTGATAGAAGCCATGGAACTCTTCTTCAATATGTGGAATTTCTTTGTAGTGCAGTTACACCAGCATCAACTTATGCCCTTCTTATTCCCTCGCTTGACGAACTAGTCCACCACTACCACCTGGACCCTGAGGTTGTGTTCTTGATATATCGCCCTGTGATGAGgcttttcaagtttcaaagaAGTCCTTATGTTTGCTGGCCCTTGGATGGTAGAGATGCTGCTAGCGACACATCTACAAACTCTGATTCTGACCCTCCAGACCATTCCAGCAGTATGGTTTTGGACCTCGGCTCTACTCAGAAGCCTATAAGTTGGTCAGATCTTCTCGATACTGTCAAAACAATGTTGCCTTCAAAAGCCTGGAATAGCCTATCTCCTGATCTTTATGCAACGTTTTGGGGTCTCACATTATATGATTTGCATGTCCCAAAAAATCGATATGAGTCTGAAATTTCCAAGCTGCATGCTAATCTTAAATCTCTGGAGGAGCTTTCTGACAATTCAAGTTCAGCGATCAccaagaggaagaaagaaaaggaaagaattcaagaatctcTTGATCGTCTAAGTATTGAACTTCGTAAACATGAAGAACATGTTGCATCTGTTCATAGACGGCTTTCCCTGGAAAAGGACAAATGGTTAAGTTCCTGTCCTGATACATTGAAGATCAACATGGAGTTTCTTCAGCGTTGTATATTTCCACGCTGTACCTTCAGTATGCCAGATGCAGTCTATTGCGCTATGTTTGTACATACACTGCATTCCCTTGGAACACCCTTCTTCAATACCGTCAACCACATTGATGTTTTGATTTGTAAGACCTTACAGCCAATGATTTGCTGCTGCACTGAATATGAGGTAGGTCGGCTTGGCAGGTTTCTATATGAGACATTGAAGATTGCATACTATTGGAAgAGTGATGAAGCTGTCTATGAACGTGAATGCGGAAATATGCCAGGATTTGCTGTTTTTTATAGAAATCCAAATGGTCAGCGAGTTACATATGGGCAGTTCATCAAGGTGCATTGGAAATGGAGTCATAGAATCACACGGTTATTGATTCAGTGTCTGGAATCTAGCGAGTACATGGAAATTAGAAATGCTCTTATAATGTTGACCAAAATCTCCAGTGTTTTCCCTGTTACTCGAAAGAGTGGGATCAACCTTGAGAAACGGGTGGctaagataaaaaatgatgaaagagaGGATCTCAAGGTTTTGGCCACTGGTGTTGCTGCAGCTTTGGCTGCTAGGAAGCCTTCCTGGGTTACTGATGAAGAGTTTGGTATGGGTCATCTTGAGCTAAAAGCTACACCATCTGTGTCTTCAAAATCTTCAGCCGGTAACTCAGTAGCTACACAAAGTGGGACAGGTCTTAATGTTACTCATACTGAACCTGCCAGCGGGAAACATTTGGACTCTGGAAACTCAATCAAAGACCATATATTAAGAACAAAACCTGCAGAGGGTAAGTCAGAAAGAACGGAAAGCATTTCAACCTCAAAATCTGATTCTGGTCAAGGAAAATACAAAGGTAGTTCATTGGCAAATGGATTGGATGGTCAGTCATTACAATCTGGTTCAtcaagatctatggaaaaccaaaaacaagcAGATGAATCCTCAAATAGATCACTCGATGAAAACGTGGCCAAAGTTGGTGAGTCAAGAACATCAGTGAAACGTTCGGTTCCTGTTGGCTCACTTACAAAGCCCTCAAAACAAGATTCTGTTAAAGAGGATGGCAGATCTGGAAAAGCTGTCACTAGGACTTCTGGTTCTTCAAACAGTGACAAGGATATACAAACTTATGCATCAGAAGGAAGACACAGTGGAACCACCaatatttcttcttcagcCAATGCCAATGGGAACGCAGTTTCAGTTTCTACCAAAGGCTCGGCTTCATCAGCAAGAACTTCATCAGATGTTCCTGGTAGTGATGCTAAGGCAGATATTGGAGTTACCAAGTCTTCTGATGCAAGGGGTTCAACAGGGAAGGATGATTCTGACTTGGCAAGAGCACCATCTTCCCGCATAGTTCATTCTCCTAGGCATGATAATGCAGTTGCCACTTCAAAGTCTAGTGATAAGGTTCAGAAGAGAGCAGGCTCAGCTGAAGAACCTGACAGACAGGGTAAACGACGGAAAGGTGATGTAGAGGCAAGAGATTTAGAAGGTGAAGTTCAATTCTCTGAGAGAGAGAGGTTAGTGGATCCTCGATATGCTGATGACAAATCAGGACCCAGTGAACAGAGTTTATATCGAGCAGGTGATAAGCCGTCAGATAGAACCAAAGACAAAGGGACTGACAGACATGACAGGGAGCACAGGGAAAGATTGGACCGGCTAGATAAGTCTCGTGGAGATGATTTTGTAGCTGAAAAACCTAGGGATAGATCAATAGAAAGATATGGAAGAGAACGTTCTGCTGAGAGAATGCAAGAGAGAGGTAATGATAGAAATATTGATAGAATTCCTGAGAAAGCTAAGGATGAACGAGGTAAAGATGATAGAAGCAAGTTGCGGTACAGTGATACATCTACAGAAAAATCTCATGGTGATGATCGCTTCCATGAGCAAAGCTTGCCTCCGCCACCCCCTTTACCTCCTAATATTGTTCCTCAATCTGTTGGTGCTGGTAGACGTGATGACGATGCTGACAGAAGGTATGGAACCACACGGCATTCCCAACGACTTTCTCCAAGGCATGAAGATAAAGAACGGAGGAGGTCTGAGGAGAATTCCTTAGTTTCACAAGATGATGCCAAACGCAGGAAAGAAGATGATTTTCGAGATCGGAAGCGTGAAGAACGAGAAGTGTTGTTGATGAAGGCAGAAGAGAGGGAGCTCcgtgagagagagagggaaagagagaaagcaagCATTCTGAAGGAAGATATGGATTTAAATGCAGCATCCAAGAGGCGTAAACTTAAGAGGGAGCATCTACCAACAAGTGAACCTGGTGAGTACTCACCAGTAGCCcctccacctccacctccTGGTATTATCTCACAATCATATGATGGAAGAGACAGGGGAGACAGAAAGGGACCCATAATCCAACGTGCCGGTTACATAGATGAACCAGGTCTCAGGATTCATGGTAAAGAGGCAGCAGCAAGCAAGATGAACCGACGCGATTCAGACCCCATGTATGACCGAGAATGGGAAGATGAGAAGAGACAGAGAGCTGATCAAAAGCGAAGGCATAGGAAGTA 5627 0.4118 MSLPAIECIYVTEDCLREWKNGNPAGKFSEPVPMLRFLYELCWTMVRGELPFQKCKVALDSVIFSDKVSKEKLASNFADIVSQMAQDLTMSAEFRSRLIKLARWLVESELVPIRLLQERCEEEFLGEAELIKIKAQDLKGKEVRVNTRLLYQQTKFNLLREESEGYAKLITLLCRDPEAPTQKASAATIGIIKSLIGHFDLDPNRVFDIVLECCELQPNSDVFLELIPIFPKSHASQILGFKFQYYQRMEVNSPVPFGLYKLTALLVKQEFINLDSIYAHLLPKDDEAFEHYSTFSSRRLDEANKIGKINLAAIGKDLMDEEKQGDVTIDLFAALDMETEAVEERTSELQNNQTLGLLTGFLSVDDWYHAHILFDRLSPLNPVEHNQICNSLFRLIEKSISSANVVAHQAHLHNLASSSGGSNDVMDIDNSSQHSSFIDLPKELFQMLACTGPYLYRDTILLQKVCRVLRGYYLAALQLVNGGEGALNPESLVNGNPRLHLKEARLRIEDALGTCLLPSLQLIPANPAVGQEIWELMSLLPYEVRYRLYGEWEKDDDRTPMLLAARQTAKLDTRRILKRLAKENLKQLGRMVAKLAHANPMTVLRTIVLQIEAYRDMITPVVDAFKYLTQLEYDILEYVVMERLALAGRDKLKDDGLNLSDWLQSLASFWGHLCKKYPSMELRGLFQYLVNQLKKGQGIELVLLQELIQQMANVQYTENLTEEQLDAMAGSETLRYQATSFGVTRNNKALIKSTNRLRDALLPKDEPKLAIPLLLLIAQHRSLVVINADAPYIKMVSEQFDRSHGTLLQYVEFLCSAVTPASTYALLIPSLDELVHHYHLDPEVVFLIYRPVMRLFKFQRSPYVCWPLDGRDAASDTSTNSDSDPPDHSSSMVLDLGSTQKPISWSDLLDTVKTMLPSKAWNSLSPDLYATFWGLTLYDLHVPKNRYESEISKLHANLKSLEELSDNSSSAITKRKKEKERIQESLDRLSIELRKHEEHVASVHRRLSLEKDKWLSSCPDTLKINMEFLQRCIFPRCTFSMPDAVYCAMFVHTLHSLGTPFFNTVNHIDVLICKTLQPMICCCTEYEVGRLGRFLYETLKIAYYWKSDEAVYERECGNMPGFAVFYRNPNGQRVTYGQFIKVHWKWSHRITRLLIQCLESSEYMEIRNALIMLTKISSVFPVTRKSGINLEKRVAKIKNDEREDLKVLATGVAAALAARKPSWVTDEEFGMGHLELKATPSVSSKSSAGNSVATQSGTGLNVTHTEPASGKHLDSGNSIKDHILRTKPAEGKSERTESISTSKSDSGQGKYKGSSLANGLDGQSLQSGSSRSMENQKQADESSNRSLDENVAKVGESRTSVKRSVPVGSLTKPSKQDSVKEDGRSGKAVTRTSGSSNSDKDIQTYASEGRHSGTTNISSSANANGNAVSVSTKGSASSARTSSDVPGSDAKADIGVTKSSDARGSTGKDDSDLARAPSSRIVHSPRHDNAVATSKSSDKVQKRAGSAEEPDRQGKRRKGDVEARDLEGEVQFSERERLVDPRYADDKSGPSEQSLYRAGDKPSDRTKDKGTDRHDREHRERLDRLDKSRGDDFVAEKPRDRSIERYGRERSAERMQERGNDRNIDRIPEKAKDERGKDDRSKLRYSDTSTEKSHGDDRFHEQSLPPPPPLPPNIVPQSVGAGRRDDDADRRYGTTRHSQRLSPRHEDKERRRSEENSLVSQDDAKRRKEDDFRDRKREEREVLLMKAEERELREREREREKASILKEDMDLNAASKRRKLKREHLPTSEPGEYSPVAPPPPPPGIISQSYDGRDRGDRKGPIIQRAGYIDEPGLRIHGKEAAASKMNRRDSDPMYDREWEDEKRQRADQKRRHRK 1875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00518 1875 Pfam Transcription- and export-related complex subunit 592 667 IPR021726 -
Bva11g00518 1875 MobiDBLite consensus disorder prediction 1341 1356 - -
Bva11g00518 1875 MobiDBLite consensus disorder prediction 1240 1875 - -
Bva11g00518 1875 PANTHER THO2 PROTEIN 11 1782 IPR040007 GO:0000347|GO:0006397|GO:0006406
Bva11g00518 1875 MobiDBLite consensus disorder prediction 1832 1867 - -
Bva11g00518 1875 MobiDBLite consensus disorder prediction 1501 1547 - -
Bva11g00518 1875 MobiDBLite consensus disorder prediction 1275 1299 - -
Bva11g00518 1875 MobiDBLite consensus disorder prediction 1240 1272 - -
Bva11g00518 1875 Coils Coil 972 1006 - -
Bva11g00518 1875 Coils Coil 1735 1765 - -
Bva11g00518 1875 Coils Coil 944 964 - -
Bva11g00518 1875 MobiDBLite consensus disorder prediction 1388 1445 - -
Bva11g00518 1875 MobiDBLite consensus disorder prediction 1792 1806 - -
Bva11g00518 1875 MobiDBLite consensus disorder prediction 1300 1340 - -
Bva11g00518 1875 PANTHER THO COMPLEX SUBUNIT 2 11 1782 - -
Bva11g00518 1875 Pfam Transcription factor/nuclear export subunit protein 2 921 1215 IPR021418 -
Bva11g00518 1875 MobiDBLite consensus disorder prediction 1682 1788 - -
Bva11g00518 1875 MobiDBLite consensus disorder prediction 1558 1661 - -
Bva11g00518 1875 Pfam THO complex subunit 2 N-terminus 430 590 IPR032302 -
Bva11g00518 1875 Pfam THO complex subunit 2 N-terminus 37 404 IPR032302 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00518 Bva-Chr11 8777556 8802819 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00518 11 8777556 8802819 Bva11g00518 11 8777556 8802819 ECH