Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00517 ATGGCAGTTCTGCAGAAGCTCTTCATGTCTGTCATGGTTCTCTTATGCATGTATTTTGTGGTGGTTGATGGGGCAATAGCAACTGCAACCTATTACAATCCACCCTACACTCACAaAAAGAGTGGAGTGATGATTGCAGCTGCAAGCAAGGAACTGTGGAACAATAGGGCAGTGTGTGGGAAGAGATATAGGGTTAAGTGCTTGGGAGCCACAAACAGAAGGGCACCTTACCCTTGCAAAccaaagaatgaaattgaaattaccATTGTGGACTTGTGCCCAGGATGCAAAGGCCTTAGCATTGACTTGTCAAGGGAAGCCTTTGGAGTCATTGCAGCTCTCAGTGCTGGAAGGATTGACATACAGCTTCTGCCACTTtg 380 0.4395 MAVLQKLFMSVMVLLCMYFVVVDGAIATATYYNPPYTHKKSGVMIAAASKELWNNRAVCGKRYRVKCLGATNRRAPYPCKPKNEIEITIVDLCPGCKGLSIDLSREAFGVIAALSAGRIDIQLLPL 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00517 126 Pfam Lytic transglycolase 46 122 IPR009009 -
Bva11g00517 126 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 23 126 IPR007112 -
Bva11g00517 126 SUPERFAMILY Barwin-like endoglucanases 12 122 IPR036908 -
Bva11g00517 126 SMART dpbb_1 45 123 IPR007112 -
Bva11g00517 126 Gene3D - 25 123 IPR036908 -
Bva11g00517 126 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 5 122 IPR044206 GO:0009627|GO:0048046
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00517 23 112 Expansin Gene Family AT1G65680 31.776 1.55e-07 46.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00517 11 8774645 8776196 Bva11g00517 11 8774645 8776196 ECH