Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00511 ATGATGACCCCAAATTTGAACATCGAACCCGAAAATGATTCAGAAGGAAGCAGCCAAGTAGCCTCCAATATCTCTCTGCAGGAAATTTCCCATGATCGTACCAAAGACAGCACAACTACTTCTTCCTGTCTTACCAAGTCTGAACATGATCAAGGGTCTGTTTCCCTTAACTTGGCACTCAACTTCTGTTCTAGCGATGGCGAATTGAAGGGCATGAGTGATGCTAGCAGTGAAGTAGGAGCCGATGCTCATCCTTCGGCAACTGCCATTCCAAGAGTTTTCTCTTGTAATTACTGTAGGCGCAAGTTCTACAGTTCACAGGCATTAGGTGGCCATCAGAATGCTCATAAAAGGGAGAGAACAATGGCAAAGCGCGCAATGAGAATGGGAATGTTCACTGATAGGTATACAAGCTTGGCATCTCTTCCCCTTCATGGTTCTGCTTTTAGGTCTCTTGGCGTTGAAGCTCATTCTGCAATGCACCAATACCAAAGACATGTGCCACCATCACAAATGGCTCCTTATATGAGACCTGCAGCAAAATTTCAGAAAGACTACTTTGGAGCAGCACCAATCTTCACGGAAGATGATGATGTGGGTCTCGTTTGGCCCGGGAGCTTCCGGCAGATCAATGCAGGTTCTGGCATTGGCAAAGGAAATGAACATGCTCAAGATTCAAACACTAGTATACTAGCAATGCCAATGGCAGCTCCACCACAAACACCTTCATCTCTTGATCTGACTCTGAAGCTCTg 755 0.457 MMTPNLNIEPENDSEGSSQVASNISLQEISHDRTKDSTTTSSCLTKSEHDQGSVSLNLALNFCSSDGELKGMSDASSEVGADAHPSATAIPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMRMGMFTDRYTSLASLPLHGSAFRSLGVEAHSAMHQYQRHVPPSQMAPYMRPAAKFQKDYFGAAPIFTEDDDVGLVWPGSFRQINAGSGIGKGNEHAQDSNTSILAMPMAAPPQTPSSLDLTLKL 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00511 251 PANTHER ZINC FINGER PROTEIN 3-RELATED 7 251 - -
Bva11g00511 251 ProSiteProfiles Zinc finger C2H2 type domain profile. 94 121 IPR013087 -
Bva11g00511 251 PANTHER ZINC FINGER PROTEIN JAGGED 7 251 IPR045320 GO:0003700
Bva11g00511 251 MobiDBLite consensus disorder prediction 1 47 - -
Bva11g00511 251 Gene3D Classic Zinc Finger 83 140 - -
Bva11g00511 251 SUPERFAMILY beta-beta-alpha zinc fingers 92 122 IPR036236 -
Bva11g00511 251 MobiDBLite consensus disorder prediction 1 28 - -
Bva11g00511 251 ProSitePatterns Zinc finger C2H2 type domain signature. 96 116 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00511 Bva-Chr11 8702377 8706262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00511 92 251 C2H2 Transcription Factor Family AT1G66140 47.283 4.67e-44 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bva11g00511 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00511 11 8702377 8706262 Bva11g00511 11 8702377 8706262 ECH